Job Description P33020 Confidence 99.71% Date Thu Jan 5 11:50:55 GMT 2012 Rank 45 Aligned Residues 189 % Identity 15% Template c3mbjA_ PDB info PDB header:transferase Chain: A: PDB Molecule:putative phosphomethylpyrimidine kinase; PDBTitle: crystal structure of a putative phosphomethylpyrimidine kinase2 (bt_4458) from bacteroides thetaiotaomicron vpi-5482 at 2.10 a3 resolution (rhombohedral form) Resolution 2.10 Å

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		171	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.				.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210						.	.	.	.	.	.	.	.	.												220	.	.	.	.	.	.	.	.	.	230	.
Predicted Secondary structure																		.	.	.																									.	.	.	.	.										.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																		.	.	.																									.	.	.	.	.										.	.	.	.	.	.	.	.	.	.	.
Query Sequence		E	Q	L	T	P	Q	L	L	N	G	S	R	D	L	L	R	.	.	.	H	A	G	V	V	L	A	D	C	N	L	T	A	E	A	L	E	W	V	F	T	L	A	D	.	.	.	.	.	E	I	P	V	F	V	D	T	V	.	.	.	.	.	.	.	.	.	.	.	S	E	F	K	A	G	K	I	K	H	W	L
Query Conservation																		.	.	.																									.	.	.	.	.										.	.	.	.	.	.	.	.	.	.	.
Alig confidence																		.	.	.																									.	.	.	.	.										.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	D	L	T	D	E	X	P	K	I	I	A	E	W	K	K	L	E	V	Q	F	D	A	I	Y	T	G	Y	L	G	S	P	R	Q	I	Q	I	V	S	D	F	I	K	D	F	R	Q	P	D	S	L	I	V	A	D	P	V	L	G	D	N	G	R	L	Y	T	N	F	D	X	E	X	V	K	E	X	R	H	L	I
Template Known Secondary structure					T	T	T												T				S									S																	T	T												T	T				T	T
Template Predicted Secondary structure
Template SS confidence
		57	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.
		232	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.				.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.					.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.
Predicted Secondary structure																								.	.	.																									.	.	.	.
Query SS confidence																								.	.	.																									.	.	.	.
Query Sequence		A	H	I	H	T	L	K	P	T	L	P	E	L	E	I	L	W	G	Q	A	I	T	.	.	.	S	D	A	D	R	N	T	A	V	N	A	L	H	Q	Q	G	V	Q	Q	L	F	V	Y	L	.	.	.	.	P	D	E	S	V	Y	C	S	E	K	D	G	E	Q	F	L	L	T	A	P	A	H	T	T	V	D	S
Query Conservation																								.	.	.																									.	.	.	.
Alig confidence																								.	.	.																									.	.	.	.
Template Conservation
Template Sequence		T	K	A	D	V	I	T	P	N	L	T	E	L	F	Y	L	L	D	E	P	Y	K	A	D	S	T	D	E	E	L	K	E	Y	L	R	L	L	S	D	K	G	P	Q	V	V	I	I	T	S	V	P	V	H	H	K	T	S	V	Y	A	Y	N	R	Q	G	N	R	Y	W	K	V	T	C	P	Y	L	P	A	H	Y
Template Known Secondary structure		T	T		S					B									T					S																T	T	S		S																				T	T	T	T											S
Template Predicted Secondary structure
Template SS confidence
		137	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.
		305	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.					350	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																															.	.	.	.
Query SS confidence																																															.	.	.	.
Query Sequence		F	G	A	D	D	G	F	M	A	G	L	V	Y	S	F	L	E	G	Y	S	F	R	D	S	A	R	F	A	V	A	C	A	A	I	S	R	A	S	G	S	L	N	N	P	T	.	.	.	.	L	S	A	D	N	A	L	S	L	V
Query Conservation																																															.	.	.	.
Alig confidence																																															.	.	.	.
Template Conservation
Template Sequence		P	G	T	G	D	T	F	T	S	V	I	T	G	S	L	X	Q	G	D	S	L	P	X	A	L	D	R	A	T	Q	F	I	L	Q	G	I	R	A	T	F	G	Y	E	Y	D	N	R	E	G	I	L	L	E	K	V	L	H	N	L
Template Known Secondary structure		T	T															T	T																							T	S				G	G	G								G	G	G	G
Template Predicted Secondary structure
Template SS confidence
		220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions