Job Description P33020 Confidence 100.00% Date Thu Jan 5 11:50:55 GMT 2012 Rank 34 Aligned Residues 281 % Identity 15% Template c3julA_ PDB info PDB header:transferase Chain: A: PDB Molecule:lin2199 protein; PDBTitle: crystal structure of listeria innocua d-tagatose-6-phosphate2 kinase bound with substrate Resolution 2.40 Å

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		60	.	.	.	.	.	.	.			.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.		.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.
Predicted Secondary structure										.	.																		.
Query SS confidence										.	.																		.
Query Sequence		C	V	V	V	G	T	I	N	.	.	M	D	I	R	G	M	A	D	I	R	Y	P	Q	S	A	S	H	.	P	G	T	I	H	C	S	A	G	G	V	G	R	N	I	A	H	N	L	A	L	L	G	R	D	V	H	L	L	S	V	I	G	D	D	F	Y	G	E	M	L	L	E	E	T	R	R	A	G	V	N	V
Query Conservation										.	.																		.
Alig confidence						.				.	.																		.																																				.
Template Conservation						.																																																											.
Template Sequence		I	Y	T	I	.	T	L	N	P	A	I	D	R	L	L	F	I	R	G	E	L	E	K	R	K	T	N	R	V	I	K	T	E	F	D	C	G	G	K	G	L	H	V	S	G	V	L	S	K	F	G	I	K	N	E	A	L	G	I	A	G	S	D	.	N	L	D	K	L	Y	A	I	L	K	E	K	H	I	N	H
Template Known Secondary structure						.		S	S										S	S	S			S	S	S					S								S												T	T											S	T	.	T											T	T			B
Template Predicted Secondary structure						.																																																											.
Template SS confidence
		2	.	.	.		.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.		.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
		137	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.			.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.					.	200	.	.	.	.	.	.	.	.	.	210
Predicted Secondary structure																																		.	.																															.	.	.	.
Query SS confidence																																		.	.																															.	.	.	.
Query Sequence		S	G	C	V	R	L	H	G	Q	S	T	S	T	Y	L	A	I	A	N	R	D	D	Q	T	V	L	A	I	N	D	T	H	.	.	L	L	E	Q	L	T	P	Q	L	L	N	G	S	R	D	L	L	R	H	A	G	V	V	L	A	D	C	N	L	T	.	.	.	.	A	E	A	L	E	W	V	F	T	L	A	D
Query Conservation																																		.	.																															.	.	.	.
Alig confidence					.																													.	.																															.	.	.	.
Template Conservation					.
Template Sequence		D	F	L	.	V	E	A	G	T	S	T	R	E	C	F	V	V	L	S	D	D	T	N	G	S	T	X	I	P	E	A	G	F	T	V	S	Q	T	N	K	D	N	L	L	K	Q	I	A	K	K	V	K	K	E	D	X	V	V	I	A	G	S	P	P	P	H	Y	T	L	S	D	F	K	E	L	L	R	T	V	K
Template Known Secondary structure					.			T	T												T	T		S																														T	T	S						S				T	T
Template Predicted Secondary structure					.
Template SS confidence
		80	.	.		.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
		211	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290
Predicted Secondary structure
Query SS confidence
Query Sequence		E	I	P	V	F	V	D	T	V	S	E	F	K	A	G	K	I	K	H	W	L	A	H	I	H	T	L	K	P	T	L	P	E	L	E	I	L	W	G	Q	A	I	T	S	D	A	D	R	N	T	A	V	N	A	L	H	Q	Q	G	V	Q	Q	L	F	V	Y	L	P	D	E	S	V	Y	C	S	E	K	D	G	E
Query Conservation
Alig confidence										.																																							.	.	.	.																													.
Template Conservation										.																																							.	.	.	.																													.
Template Sequence		A	T	G	A	F	L	G	C	.	D	N	S	G	E	Y	L	N	L	A	V	E	X	G	V	D	F	I	K	P	N	E	D	E	V	I	A	I	L	D	E	K	T	N	S	L	E	E	.	.	.	.	N	I	R	T	L	A	E	K	I	P	Y	L	V	V	S	L	G	A	K	G	S	I	C	A	H	N	G	K	.
Template Known Secondary structure		T	T	T						.														T		S					B									T			S	S					.	.	.	.							T	T		S							G	G	G							T	T		.
Template Predicted Secondary structure										.																																							.	.	.	.																													.
Template SS confidence
		159	160	.	.	.	.	.	.		.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.					.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.
		291	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	F	L	L	T	A	P	A	H	T	T	V	D	S	F	G	A	D	D	G	F	M	A	G	L	V	Y	S	F	L	E	G	Y	S	F	R	D	S	A	R	F	A	V	A	C	A	A	I	S	R	A	S	G	S	L	N	N	P	T	L	S	A	D	N	A	L	S	L	V	P	M	V
Query Conservation
Alig confidence		.	.	.	.	.	.	.																																																.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.																																																.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	L	Y	Q	V	I	P	P	T	G	A	G	D	V	F	V	G	A	F	I	A	G	L	A	X	N	X	P	I	T	E	T	L	K	V	A	T	G	C	S	A	S	K	V	X	Q	Q	F	.	.	.	.	.	.	D	L	E	A	A	G	K	L	K	N	Q	V
Template Known Secondary structure		.	.	.	.	.	.	.																								T	T																		T	T				.	.	.	.	.	.										T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.																																																.	.	.	.	.	.
Template SS confidence
									233	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.							280	.	.	.	.	.	.	.	.	.	290	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions