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Job DescriptionP33020
Confidence100.00%DateThu Jan 5 11:50:55 GMT 2012
Rank9Aligned Residues297
% Identity23%Templatec3in1A_
PDB info PDB header:transferaseChain: A: PDB Molecule:uncharacterized sugar kinase ydjh; PDBTitle: crystal structure of a putative ribokinase in complex with2 adp from e.coli
Resolution2.15 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   5960.........70... ......80...... ...90.........100.........110.........120.........130......
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Query Sequence  YCVVVGTINMDIRGM. ADIRYPQSASHPG. TIHCSAGGVGRNIAHNLALLGRDVHLLSVIGDDFYGEMLLEETRRAGVNV
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Template Sequence  DVICIGAAIVDIPLQPVSKNIFDVDSYPLERIAXTTGGDAINEATIISRLGHRTALXSRIGKDAAGQFILDHCRKENIDI
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SSGGGSS



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B
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   5....10.........20.........30.........40.........50.........60.........70.........80....
 
   137..140.........150.........160.........170.........180.........190... ......200.........210
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Query Sequence  SGCVRLHGQSTSTYLAIANRDDQTVLAINDTHLLEQLTPQLLNGSRDLLRHAGVVLA. . . . . DCNLTAEALEWVFTLAD.
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Template Sequence  QSLKQDVSIDTSINVGLVTEDGERTFVTNRNGSLWKLNIDDVDFAR. . FSQAKLLSLASIFNSPLLDGKALTEIFTQAKA
Template Known Secondary structure  TTTTS


TTS


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GGG..GGG
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   85....90.........100.........110.........120.........130 .........140.........150.........160..
 
   211........220 .........230.........240.........250.........260.........270.........280......
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Query Sequence  . EIPVFVDTVS. . . EFKAGKIKHWLAHIHTLKPTLPELEILWGQAITSDADRNTAVNALHQQGVQQLFVYLPDESVYCSE
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Template Sequence  RQXIICADXIKPRLNETLDDICEALSYVDYLFPNFAEAKLLTGKE. . . . . TLDEIADCFLACGVKTVVIKTGKDGCFIKR
Template Known Secondary structure  TT



SSS

GGGGTT
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   163......170.........180.........190.........200....... ..210.........220.........230.......
 
   287..290.........300.........310.........320.........330.........340.........350.........360..
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Query Sequence  KDGEQFLLTAPAHTTVDSFGADDGFMAGLVYSFLEGYSFRDSARFAVACAAISRASGSLNNPTLSADNALSLVPMV
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Template Sequence  GDXTXKVPAVAGITAIDTIGAGDNFASGFIAALLEGKNLRECARFANATAAISVLSVGATTGVKNRKLVEQLLEEY
Template Known Secondary structure  TT


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TTTT

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   238.240.........250.........260.........270.........280.........290.........300.........310...
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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