Job Description P33020 Confidence 99.60% Date Thu Jan 5 11:50:55 GMT 2012 Rank 50 Aligned Residues 185 % Identity 14% Template c3ibqA_ PDB info PDB header:transferase Chain: A: PDB Molecule:pyridoxal kinase; PDBTitle: crystal structure of pyridoxal kinase from lactobacillus2 plantarum in complex with atp Resolution 2.00 Å

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		174	.	.	.	.	.	180	.	.	.	.	.	.					.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.				.	.	.	.	210	.	.	.	.	.	.	.	.												.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.
Predicted Secondary structure															.	.	.	.																				.	.	.														.	.	.	.	.	.	.	.	.	.	.
Query SS confidence															.	.	.	.																				.	.	.														.	.	.	.	.	.	.	.	.	.	.
Query Sequence		T	P	Q	L	L	N	G	S	R	D	L	L	R	.	.	.	.	H	A	G	V	V	L	A	D	C	N	L	T	A	E	A	L	E	W	V	.	.	.	F	T	L	A	D	E	I	P	V	F	V	D	T	.	.	.	.	.	.	.	.	.	.	.	V	S	E	F	K	A	G	K	I	K	H	W	L	A	H	I	H
Query Conservation															.	.	.	.																				.	.	.														.	.	.	.	.	.	.	.	.	.	.
Alig confidence															.	.	.	.																				.	.	.														.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	S	T	W	L	P	Q	V	F	A	H	W	T	R	A	Q	L	H	F	D	Q	A	L	I	G	Y	V	G	S	V	A	L	C	Q	Q	I	T	T	Y	L	E	Q	Q	T	L	S	L	L	V	V	D	P	V	L	G	D	L	G	Q	L	Y	Q	G	F	D	Q	D	Y	V	A	A	X	R	Q	L	I	Q	Q	A	D
Template Known Secondary structure			T	T												T	T				S																							S			S											T	T				T	T														T	T		S
Template Predicted Secondary structure
Template SS confidence
		55	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.
		236	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.				.	.	270	.	.	.	.	.	.	.	.	.	280				.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																		.	.	.														.	.	.
Query SS confidence																																		.	.	.														.	.	.
Query Sequence		T	L	K	P	T	L	P	E	L	E	I	L	W	G	Q	A	I	T	S	D	A	D	R	N	T	A	V	N	A	L	H	Q	.	.	.	Q	G	V	Q	Q	L	F	V	Y	L	P	D	E	.	.	.	S	V	Y	C	S	E	K	D	G	E	Q	F	L	L	T	A	P	A	H	T	T	V	D	S	F	G	A	D	D
Query Conservation																																		.	.	.														.	.	.
Alig confidence																																		.	.	.														.	.	.																				.
Template Conservation																																																																								.
Template Sequence		V	I	L	P	N	T	T	E	A	A	L	L	T	G	A	P	Y	Q	V	T	P	D	L	E	V	I	L	P	A	L	Q	A	Q	L	K	T	G	A	H	A	V	I	T	D	V	Q	R	A	D	Q	I	G	C	A	W	L	D	E	A	G	H	V	Q	Y	C	G	A	R	R	L	.	P	G	H	Y	N	G	T	G	D
Template Known Secondary structure															T					S	S												T	T	S		T	T											T	T									T	T	S											.	S	S			S	S
Template Predicted Secondary structure																																																																								.
Template SS confidence
		135	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.		.	.	.	.	.	210	.	.	.
		310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.						.	.	350	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																								.	.	.	.	.
Query SS confidence																																								.	.	.	.	.
Query Sequence		G	F	M	A	G	L	V	Y	S	F	L	E	G	Y	S	F	R	D	S	A	R	F	A	V	A	C	A	A	I	S	R	A	S	G	S	L	N	N	.	.	.	.	.	P	T	L	S	A	D	N	A	L	S	L	V
Query Conservation																																								.	.	.	.	.
Alig confidence																																								.	.	.	.	.
Template Conservation
Template Sequence		T	L	A	A	V	I	A	G	L	L	G	R	G	Y	P	L	A	P	T	L	A	R	A	N	Q	W	L	N	X	A	V	A	E	T	I	A	Q	N	R	T	D	D	R	Q	G	V	A	L	G	D	L	L	Q	A	I
Template Known Secondary structure													T	T																								T			S		T	T	S
Template Predicted Secondary structure
Template SS confidence
		214	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions