Job Description P33020 Confidence 96.51% Date Thu Jan 5 11:50:55 GMT 2012 Rank 152 Aligned Residues 94 % Identity 26% Template c3ereD_ PDB info PDB header:dna binding protein/dna Chain: D: PDB Molecule:arginine repressor; PDBTitle: crystal structure of the arginine repressor protein from mycobacterium2 tuberculosis in complex with the dna operator Resolution 2.50 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.						.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.						.			50	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																											.	.	.	.	.																						.	.	.	.	.		.	.											.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																											.	.	.	.	.																						.	.	.	.	.		.	.											.	.	.	.	.	.	.	.	.	.	.
Query Sequence		N	R	E	K	E	I	L	A	I	L	R	R	N	P	L	I	Q	Q	N	E	I	A	D	M	L	.	.	.	.	.	Q	I	S	R	S	R	V	A	A	H	I	M	D	L	M	R	K	G	R	I	K	.	.	.	.	.	G	.	.	K	G	Y	I	L	T	E	Q	E	Y	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																											.	.	.	.	.																						.	.	.	.	.		.	.											.	.	.	.	.	.	.	.	.	.	.
Alig confidence																											.	.	.	.	.															.	.	.					.	.	.	.	.		.	.											.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																														.	.	.
Template Sequence		G	R	Q	A	R	I	V	A	I	L	S	S	A	Q	V	R	S	Q	N	E	L	A	A	L	L	A	A	E	G	I	E	V	T	Q	A	T	L	S	R	D	L	E	E	L	.	.	.	G	A	V	K	L	R	G	A	D	G	G	T	G	I	Y	V	V	P	E	D	G	S	P	V	R	G	V	S	G	G	T	D	R
Template Known Secondary structure													T					S											T	T														T	T	.	.	.	T							T	T	S	S										S						T	T	T	T
Template Predicted Secondary structure																																														.	.	.
Template SS confidence
		20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.				.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.
													60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	C	V	V	V	G	T	I	N	M	D	I	R	G	M	A	D	I	R	Y	P	Q	S	A	S	H	P	G	T	I	H	C	S	A	G	G	V	G	R	N	I	A	H	N	L	A	L	L	G	R	D	V	H	L	L	S	V	I	G	D	D
Query Conservation		.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		M	A	R	L	L	G	E	L	L	V	S	T	D	D	S	G	N	L	A	V	L	R	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	P	G	A	A	H	Y	L	A	S	A	I	D	R	A	A	L	P	Q	V	V	G	T	I	A	G	D	D
Template Known Secondary structure																	T	T							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	T	T	T											T	T		T	T								S	S
Template Predicted Secondary structure																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		97	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.																					120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions