Job Description P33020 Confidence 93.68% Date Thu Jan 5 11:50:55 GMT 2012 Rank 252 Aligned Residues 82 % Identity 28% Template c2v1dA_ PDB info PDB header:oxidoreductase/repressor Chain: A: PDB Molecule:lysine-specific histone demethylase 1; PDBTitle: structural basis of lsd1-corest selectivity in histone h32 recognition Resolution 3.10 Å

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		5	.	.	.	.	10	.	.	.	.	.	.			.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.					.	.	.	.	.	.	40	.	.	.	.	.	.	.							.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.
Predicted Secondary structure														.	.																		.	.	.	.															.	.	.	.	.	.
Query SS confidence														.	.																		.	.	.	.															.	.	.	.	.	.
Query Sequence		E	K	E	I	L	A	I	L	R	R	N	P	.	.	L	I	Q	Q	N	E	I	A	D	M	L	Q	I	S	R	S	R	.	.	.	.	V	A	A	H	I	M	D	L	M	R	K	G	R	I	.	.	.	.	.	.	K	G	K	G	Y	I	L	T	E	Q	E	Y	C	V	V	V	G	T	I	N	M	D	I	R	G
Query Conservation														.	.																		.	.	.	.															.	.	.	.	.	.
Alig confidence														.	.																		.	.	.	.															.	.	.	.	.	.																		.	.	.	.	.	.	.	.
Template Conservation																																																																										.	.	.	.	.	.	.	.
Template Sequence		R	N	R	T	L	Q	L	W	L	D	N	P	K	I	Q	L	T	F	E	A	T	L	Q	Q	L	E	A	P	Y	N	S	D	T	V	L	V	H	R	V	H	S	Y	L	E	R	H	G	L	I	N	F	G	I	Y	K	R	I	K	P	L	P	T	K	K	T	G	K	V	I	I	I	G	.	.	.	.	.	.	.	.
Template Known Secondary structure													T	T	B													T	T	G	G	G															T	T	S	S	S		S	S		B		S	S				S	S			S							.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																										.	.	.	.	.	.	.	.
Template SS confidence
		214	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.
		73	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	A	D	I	R	Y	P	Q	S	A	S	H	P	G	T	I	H	C	S	A	G	G	V	G	R	N	I	A	H	N	L	A	L	L	G	R	D	V	H	L	L
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	G	V	S	G	L	A	A	A	R	Q	L	Q	S	F	G	M	D	V	T	L	L
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		S													T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																					286	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions