Job Description P33020 Confidence 99.69% Date Thu Jan 5 11:50:55 GMT 2012 Rank 46 Aligned Residues 227 % Identity 15% Template c2i5bC_ PDB info PDB header:transferase Chain: C: PDB Molecule:phosphomethylpyrimidine kinase; PDBTitle: the crystal structure of an adp complex of bacillus2 subtilis pyridoxal kinase provides evidence for the3 parralel emergence of enzyme activity during evolution Resolution 2.80 Å

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		58	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100			.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.
Predicted Secondary structure																																													.	.
Query SS confidence																																													.	.
Query Sequence		E	Y	C	V	V	V	G	T	I	N	M	D	I	R	G	M	A	D	I	R	Y	P	Q	S	A	S	H	P	G	T	I	H	C	S	A	G	G	V	G	R	N	I	A	.	.	H	N	L	A	L	L	G	R	D	V	H	L	L	S	V	I	G	D	D	F	Y	G	E	M	L	L	E	E	T	R	R	A	G	V	N
Query Conservation																																													.	.
Alig confidence												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		H	K	A	L	T	I	A	G	S	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	S	G	G	A	G	I	Q	A	D	L	K	T	F	Q	E	K	N	V	Y	G	M	T	A	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T	S	S	S												T	T								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		4	.	.	.	.	.	10	.	.	.																									.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.
		136	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.				.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.				.	.	.	.
Predicted Secondary structure																																																				.	.	.																					.	.	.
Query SS confidence																																																				.	.	.																					.	.	.
Query Sequence		V	S	G	C	V	R	L	H	G	Q	S	T	S	T	Y	L	A	I	A	N	R	D	D	Q	T	V	L	A	I	N	D	T	H	L	L	E	Q	L	T	P	Q	L	L	N	G	S	R	D	L	L	.	.	.	R	H	A	G	V	V	L	A	D	C	N	L	T	A	E	A	L	E	W	V	.	.	.	F	T	L	A
Query Conservation																																																				.	.	.																					.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.	.	.	.														.	.	.																					.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	T	V	I	V	A	M	D	P	N	N	S	W	N	H	Q	V	F	P	.	.	.	.	.	.	I	D	T	D	T	I	R	A	Q	L	A	T	I	T	D	G	I	G	V	D	A	M	K	T	G	M	L	P	T	V	D	I	I	E	L	A	A	K	T	I	K	E	K
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.								T	T	T	T	T							.	.	.	.	.	.															T	T	S			S									S														T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.	.	.	.
Template SS confidence
															39	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.							.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.
		210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.												.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.		.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.
Predicted Secondary structure																				.	.	.	.	.	.	.	.	.	.	.																									.
Query SS confidence																				.	.	.	.	.	.	.	.	.	.	.																									.
Query Sequence		D	E	I	P	V	F	V	D	T	V	S	E	F	K	A	G	K	I	.	.	.	.	.	.	.	.	.	.	.	K	H	W	L	A	H	I	H	T	L	K	P	T	L	P	E	L	E	I	L	W	G	Q	A	.	I	T	S	D	A	D	R	N	T	A	V	N	A	L	H	Q	Q	G	V	Q	Q	L	F	V	Y	L
Query Conservation																				.	.	.	.	.	.	.	.	.	.	.																									.
Alig confidence																				.	.	.	.	.	.	.	.	.	.	.																									.
Template Conservation
Template Sequence		Q	L	K	N	V	V	I	D	P	V	M	V	C	K	G	A	N	E	V	L	Y	P	E	H	A	Q	A	L	R	E	Q	L	A	P	L	A	T	V	I	T	P	N	L	F	E	A	S	Q	L	S	G	M	D	E	L	K	T	V	D	D	M	I	E	A	A	K	K	I	H	A	L	G	A	Q	Y	V	V	I	T	G
Template Known Secondary structure		T		S	S								S	S	B		S	S	S	B	S												T	G	G	G		S					B									T						S													T	T	T		S
Template Predicted Secondary structure
Template SS confidence
		100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.
		278	.	280	.	.						.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.
Predicted Secondary structure							.	.	.	.	.
Query SS confidence							.	.	.	.	.
Query Sequence		P	D	E	S	V	.	.	.	.	.	Y	C	S	E	K	D	G	E	Q	F	L	L	T	A	P	A	H	T	T	V	D	S	F	G	A	D	D	G	F	M	A	G	L	V	Y	S	F	L	E	G	Y	S	F	R	D	S	A	R	F	A	V	A	C	A	A	I	S	R	A	S	G	S	L	N	N	P
Query Conservation							.	.	.	.	.
Alig confidence							.	.	.	.	.
Template Conservation
Template Sequence		G	G	K	L	K	H	E	K	A	V	D	V	L	Y	D	G	E	T	A	E	V	L	E	S	E	M	I	D	T	P	Y	T	H	G	A	G	C	T	F	S	A	A	V	T	A	E	L	A	K	G	A	E	V	K	E	A	I	Y	A	A	K	E	F	I	T	A	A	I	K	E	S	F	P	L	N	Q
Template Known Secondary structure		G	G	G	S		S	S	S								S	S													S			B	T															T	T																				T				S	S	S
Template Predicted Secondary structure
Template SS confidence
		180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions