Return to main results Retrieve Phyre Job Id

Job DescriptionP33020
Confidence93.15%DateThu Jan 5 11:50:55 GMT 2012
Rank266Aligned Residues36
% Identity25%Templatec2fmyB_
PDB info PDB header:dna binding proteinChain: B: PDB Molecule:carbon monoxide oxidation system transcription regulator PDBTitle: co-dependent transcription factor cooa from carboxydothermus2 hydrogenoformans (imidazole-bound form)
Resolution2.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   18.20.........30.........40....... ..50...
Predicted Secondary structure 





..


Query SS confidence 





























. .





Query Sequence  IQQNEIADMLQISRSRVAAHIMDLMRKGRI. . KGKGYI
Query Conservation 
    

      
      
  
   
  .. 
  

Alig confidence 





























..





Template Conservation       

  

 

 



 
  
   
 
       
Template Sequence  LNTEEIALMLGTTRQTVSVLLNDFKKMGILERVNQRTL
Template Known Secondary structure 

TS
TTSTT
Template Predicted Secondary structure 











Template SS confidence 





































   11691170.........1180.........1190.........1200......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions