Job Description P33020 Confidence 100.00% Date Thu Jan 5 11:50:55 GMT 2012 Rank 10 Aligned Residues 290 % Identity 17% Template c2c49A_ PDB info PDB header:transferase Chain: A: PDB Molecule:sugar kinase mj0406; PDBTitle: crystal structure of methanocaldococcus jannaschii2 nucleoside kinase - an archaeal member of the ribokinase3 family Resolution 1.92 Å

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		58	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.		.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.
Predicted Secondary structure																													.
Query SS confidence																													.
Query Sequence		E	Y	C	V	V	V	G	T	I	N	M	D	I	R	G	M	A	D	I	R	Y	P	Q	S	A	S	H	.	P	G	T	I	H	C	S	A	G	G	V	G	R	N	I	A	H	N	L	A	L	L	G	R	D	V	H	L	L	S	V	I	G	D	D	F	Y	G	E	M	L	L	E	E	T	R	R	A	G	V	N	V
Query Conservation																													.
Alig confidence																													.
Template Conservation
Template Sequence		E	K	I	T	C	V	G	H	T	A	L	D	Y	I	F	N	V	E	K	F	P	E	P	N	T	S	I	Q	I	P	S	A	R	K	Y	Y	G	G	A	A	A	N	T	A	V	G	I	K	K	L	G	V	N	S	E	L	L	S	C	V	G	Y	D	F	K	N	S	G	Y	E	R	Y	L	K	N	L	D	I	N	I
Template Known Secondary structure								S											S	S				S	S						S																				T	T											T	T	T	T	T	S									T	T		B
Template Predicted Secondary structure
Template SS confidence
		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
		137	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	G	C	V	R	L	H	G	Q	S	T	S	T	Y	L	A	I	A	N	R	D	D	Q	T	V	L	A	I	N	D	T	H	L	L	E	Q	L	T	P	Q	L	L	N	G	S	R	D	L	L	R	H	A	G	V	V	L	A	D	C	N	L	T	A	E	A	L	E	W	V	F	T	L	A	D	E	I	P	V	F	V
Query Conservation
Alig confidence																																		.	.	.	.	.	.
Template Conservation																																		.	.	.	.	.	.
Template Sequence		S	K	L	Y	Y	S	E	E	E	E	T	P	K	A	W	I	F	T	D	K	D	N	N	Q	I	T	F	F	L	W	G	A	.	.	.	.	.	.	A	K	H	Y	K	E	L	N	P	P	N	F	N	T	E	I	V	H	I	A	T	G	D	P	E	F	N	L	K	C	A	K	K	A	Y	G	N	N	L	V	S	F
Template Known Secondary structure		T	T					S	S	S											T	T										G	G	.	.	.	.	.	.	G	G	G	G	G	G															S														B	T	T	B
Template Predicted Secondary structure																																		.	.	.	.	.	.
Template SS confidence
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.							.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
		217	.	.				220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.
Predicted Secondary structure					.	.	.
Query SS confidence					.	.	.
Query Sequence		D	T	V	.	.	.	S	E	F	K	A	G	K	I	K	H	W	L	A	H	I	H	T	L	K	P	T	L	P	E	L	E	I	L	W	G	Q	A	I	T	S	D	A	D	R	N	T	A	V	N	A	L	H	Q	Q	G	V	Q	Q	L	F	V	Y	L	P	D	E	S	V	Y	C	S	E	K	D	G	E	Q	F	L
Query Conservation					.	.	.
Alig confidence					.	.	.																																									.	.	.	.	.	.	.	.
Template Conservation																																																.	.	.	.	.	.	.	.
Template Sequence		D	P	G	Q	D	L	P	Q	Y	S	K	E	M	L	L	E	I	I	E	H	T	N	F	L	F	M	N	K	H	E	F	E	R	A	S	N	L	L	N	F	E	I	D	D	Y	L	.	.	.	.	.	.	.	.	E	R	V	D	A	L	I	V	T	K	G	S	K	G	S	V	I	Y	T	K	D	K	K	I	E	I
Template Known Secondary structure				G	G	G	G	G	G											T	T		S																	T								.	.	.	.	.	.	.	.	T	T		S							G	G	G							S	S
Template Predicted Secondary structure																																																.	.	.	.	.	.	.	.
Template SS confidence
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.									.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.
		294	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	T	A	P	A	H	T	T	V	D	S	F	G	A	D	D	G	F	M	A	G	L	V	Y	S	F	L	E	G	Y	S	F	R	D	S	A	R	F	A	V	A	C	A	A	I	S	R	A	S	G	S	L	N	N	P	T	L	S	A	D	N	A	L	S	L	V	P	M
Query Conservation
Alig confidence
Template Conservation
Template Sequence		P	C	I	K	A	G	K	V	I	D	P	T	G	A	G	D	S	Y	R	A	G	F	L	S	A	Y	V	K	G	Y	D	L	E	K	C	G	L	I	G	A	A	T	A	S	F	V	V	E	A	K	G	C	Q	T	N	L	P	T	W	D	K	V	V	E	R	L	E	K
Template Known Secondary structure							S	S					T	T															T	T																		T	T	S	S	S	S	S	T	T
Template Predicted Secondary structure
Template SS confidence
		232	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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