 |
Job Description | P33020 | Confidence | 45.26% | Date | Thu Jan 5 11:50:55 GMT 2012 |
Rank | 483 | Aligned Residues | 26 |
% Identity | 19% | Template | c2a6eF_ |
PDB info |
PDB header:transferase | Chain: F: PDB Molecule:rna polymerase sigma factor rpod; |
PDBTitle: crystal structure of the t. thermophilus rna polymerase2 holoenzyme
|
Resolution | 2.80 Å |
|
  |   |
19 | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . |
Predicted Secondary structure |   |
|  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
Q | Q | N | E | I | A | D | M | L | Q | I | S | R | S | R | V | A | A | H | I | M | D | L | M | R | K |
Query Conservation |   |
  |   |   |   |
|
|   |   |   |   |   |   |
|   |   |   |   |   |   |
|   |   |
|   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |
|
|
|   |   |
|
|
|
|
|
|
|
|
|
|
|
|   |
|
|
|   |
|
Template Sequence |   |
D | G | E | E | V | G | A | F | F | G | V | T | R | E | R | I | R | Q | I | E | N | K | A | L | R | K |
Template Known Secondary structure |   |
|
|
|  |  |  |  | S | S | S | S |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
377 | . | . | 380 | . | . | . | . | . | . | . | . | . | 390 | . | . | . | . | . | . | . | . | . | 400 | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|