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Job DescriptionP33020
Confidence93.07%DateThu Jan 5 11:50:55 GMT 2012
Rank269Aligned Residues185
% Identity19%Templatec1mkmA_
PDB info PDB header:transcriptionChain: A: PDB Molecule:iclr transcriptional regulator; PDBTitle: crystal structure of the thermotoga maritima iclr
Resolution2.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  NREKEILAIL. RRNPLIQQNEIADMLQISRSRVAAHIMDLMRKGRIK. . . GKGYILTEQE. . . . . . . . . . . . . . . . . . . .
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Template Sequence  KKAFEILDFIVKNPGDVSVSEIAEKFNMSVSNAYKYMVVLEEKGFVLRKKDKRYVPGYKLIEYGSFVLRRFNIRDIAHDH
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   5....10.........20.........30.........40.........50.........60.........70.........80....
 
   5960.........70.........80.........90.........100... ......110.....
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Query Sequence  . . . . . . . . . . . . . YCVVVGTINMDIRGMADIRYPQSASHPGTIHCSAGGVGRNIAHNL. . . . . . . . . . ALLGRDVHLLSV
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Template Sequence  LVDIMKRTGETVHLILKDGFEGVYIDKVEGEQSIPMVSRLGMKVDLYSTASGKSILAFVPEKELKEYLKIVELKPKTPNT
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   85....90.........100.........110.........120.........130.........140.........150.........160....
 
   116...120.........130.........140.........150.........160.........170.........180........
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Query Sequence  IGDDFYGEMLLEETRRAGVNVSGCVRLHGQSTSTYLAIANRDDQTVLAINDTHLLEQLTPQLLNGSRDLLRHA
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Template Sequence  ITNPRVLKRELEKIRKRGYAVDNEENEIGI. MCVGVPIFDHNGYPVAGVSISGVARKFTEEKIEEYSDVLKEK
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   165....170.........180.........190.... .....200.........210.........220.........230......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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