Job Description P33020 Confidence 96.81% Date Thu Jan 5 11:50:55 GMT 2012 Rank 120 Aligned Residues 99 % Identity 26% Template c1b4aA_ PDB info PDB header:repressor Chain: A: PDB Molecule:arginine repressor; PDBTitle: structure of the arginine repressor from bacillus stearothermophilus Resolution 2.50 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.						.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.							.	50	.	.	.	.	.	.	.	.	.	60	.
Predicted Secondary structure																											.	.	.	.	.																						.	.	.	.	.	.														.	.	.	.	.	.	.	.	.	.
Query SS confidence																											.	.	.	.	.																						.	.	.	.	.	.														.	.	.	.	.	.	.	.	.	.
Query Sequence		N	R	E	K	E	I	L	A	I	L	R	R	N	P	L	I	Q	Q	N	E	I	A	D	M	L	.	.	.	.	.	Q	I	S	R	S	R	V	A	A	H	I	M	D	L	M	R	K	G	R	I	K	.	.	.	.	.	.	G	K	G	Y	I	L	T	E	Q	E	Y	C	V	.	.	.	.	.	.	.	.	.	.
Query Conservation																											.	.	.	.	.																						.	.	.	.	.	.														.	.	.	.	.	.	.	.	.	.
Alig confidence																											.	.	.	.	.															.	.	.					.	.	.	.	.	.														.	.	.	.	.	.	.	.	.	.
Template Conservation																																														.	.	.
Template Sequence		Q	R	H	I	K	I	R	E	I	I	M	S	N	D	I	E	T	Q	D	E	L	V	D	R	L	R	E	A	G	F	N	V	T	Q	A	T	V	S	R	D	I	K	E	M	.	.	.	Q	L	V	K	V	P	M	A	N	G	R	Y	K	Y	S	L	P	S	D	Q	R	F	N	P	L	Q	K	L	K	R	A	L	V
Template Known Secondary structure														S				S											T	T															T	.	.	.	T							S	S	S							T	T		S	S	S
Template Predicted Secondary structure																																														.	.	.
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.				.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
				62	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.
Query SS confidence		.	.
Query Sequence		.	.	V	V	G	T	I	N	M	D	I	R	G	M	A	D	I	R	Y	P	Q	S	A	S	H	P	G	T	I	H	C	S	A	G	G	V	G	R	N	I	A	H	N	L	A	L	L	G	R	D	V	H	L	L	S	V	I	G	D	D
Query Conservation		.	.
Alig confidence		.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		D	V	F	I	K	L	D	G	T	G	N	L	L	V	L	R	T	L	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	N	A	H	A	I	G	V	L	L	D	N	L	D	W	D	E	I	V	G	T	I	C	G	D	D
Template Known Secondary structure											T	T							S	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T													T		T	T								S	S
Template Predicted Secondary structure																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100																.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions