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Job Description | P0ABC0 | Confidence | 0.67% | Date | Thu Jan 5 11:15:08 GMT 2012 |
Rank | 87 | Aligned Residues | 101 |
% Identity | 13% | Template | c3lrcC_ |
PDB info |
PDB header:transport protein | Chain: C: PDB Molecule:arginine/agmatine antiporter; |
PDBTitle: structure of e. coli adic (p1)
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Resolution | 4.00 Å |
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6 | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | |
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Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
V | S | R | N | V | A | R | K | L | L | L | V | Q | L | L | V | V | I | A | S | G | L | L | F | S | L | K | D | P | F | W | G | V | S | A | I | S | . |
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G | G | L | A | V | F | L | P | N | V | L | F | M | I | F | A | W | R | H | Q | A | H | T | P | A | K | G | R | V | A | W | T | F | A | F | G | E | A | F | K | V |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
N | K | A | G | T | P | V | A | G | L | I | I | V | G | I | L | M | T | I | F | Q | L | S | S | I | S | P | N | A | T | K | E | F | G | L | V | S | S | V | S | V | I | F | T | L | V | P | Y | L | Y | T | C | A | A | L | L | L | L | G | H | G | H | F | G | K | A | R | P | A | Y | . |
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L | A |
Template Known Secondary structure |   |
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| S | S | T | T |  |  |  |  |  | T | T |  |  |  |  |  |  |  |  |  |  |  |  | T |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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  |   |
318 | . | 320 | . | . | . | . | . | . | . | . | . | 330 | . | . | . | . | . | . | . | . | . | 340 | . | . | . | . | . | . | . | . | . | 350 | . | . | . | . | . | . | . | . | . | 360 | . | . | . | . | . | . | . | . | . | 370 | . | . | . | . | . | . | . | . | . | 380 | . | . | . | . | . | . | . | |
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84 | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . |
Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
L | A | M | L | V | L | L | V | V | A | L | A | V | L | K | A | V | F | L | P | L | I | V | T | W | V | L | V | L | V | V |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
V | T | T | I | A | F | L | Y | C | I | W | A | V | V | G | S | G | A | K | E | V | M | W | S | F | V | T | L | M | V | I |
Template Known Secondary structure |   |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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  |   |
390 | . | . | . | . | . | . | . | . | . | 400 | . | . | . | . | . | . | . | . | . | 410 | . | . | . | . | . | . | . | . | . | 420 |
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No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
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