 |
Job Description | P37666 | Confidence | 99.78% | Date | Thu Jan 5 11:56:40 GMT 2012 |
Rank | 64 | Aligned Residues | 127 |
% Identity | 20% | Template | d2dlda2 |
SCOP info | Flavodoxin-like
| Formate/glycerate dehydrogenase catalytic domain-like
| Formate/glycerate dehydrogenases, substrate-binding domain
|
Resolution | 2.70 |
|
 |
  |   |
1 | . | . | . | . | . | . | . | . | 10 | . | . | . | . | . | |
|
. | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | |
. | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | |
|
. | . | 70 | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|  |  |  |  |  |
|
|
|
|  |  |  | . | . |  |  |  |  |  |  |  |
|
|  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  | . |
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
| . | . |  |  |  |  |  |
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
Query Sequence |   |
M | K | P | S | V | I | L | Y | K | A | L | P | D | D | L | . |
. |
L | Q | R | L | Q | E | H | F | T | V | H | Q | V | A | N | L | S | P | Q | T | V | E | Q | N | A | A | I | F | A | E | A | E | G | L | L | G | . |
S | N | E | N | V | N | A | A | L | L | E | K | M | P | K | L | . |
. |
R | A | T | S | T | I | S | V |
Query Conservation |   |
|
|
|
|
|
|   |   |   |   |   |   |   |   |   | . | . |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|
|   | . |   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |
| . | . |
|   |
|   |   |   |   |   |
Alig confidence |   |
|
| . |
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
Template Conservation |   |
|
| . |
|
|
|   |   |   |   |   |   |   |
|   |   |   |   |
|   |   |   |   |   |   |   |   |   |
|
|   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |
|   |
|
|   |   |   |   |   |   |   |   |   |
|
|
|   |   |   |   |   |
|   |
|
|   |
|   |   |   |   |   |
Template Sequence |   |
M | T | . |
K | V | F | A | Y | A | I | R | K | D | E | E | P | F | L | N | E | W | K | E | A | H | K | D | I | D | V | D | Y | T | D | K | L | L | T | P | E | T | A | K | L | A | K | G | A | D | G | V | V | V | Y | Q | Q | L | D | Y | T | A | D | T | L | Q | A | L | A | D | A | G | V | T | K | M | S | L | R | N | V |
Template Known Secondary structure |   |
|
| . |  |  |  |  |  | S |
|
| T | T | T |  |  |  |  |  |  |  |  |  |  |
| T | T |
|  |  |  |
|
| S | S |
|
|
| T | T | G | G | G | G | S | T | T |
| S |  |  |  |  |
|
| S | S |
| B |
|  |  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |
| S | S | S |
Template Predicted Secondary structure |   |
|  | . |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
1 | . | |
. | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . |
  |
  |   |
76 | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
G | Y | D | N | F | D | V | D | A | L | T | A | R | K | I | L | L | M | H | T | P | T | V | L | T | E | T | V | A | D | T | L | M | A | L | V | L | S | T | A | R | R | V | V | E | V | A | E | R | V | K | A | G | E | W | T | A | S | I |
Query Conservation |   |
|   |
|   |
|
|   |   |   |   |   |   |   |
|
|   |
|   |
|   |   |   |   |   |   |   |   |
|
|
|   |   |
|   |   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |
|   |
|   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
Template Conservation |   |
|   |
|   |
|
|   |   |
|
|   |   |   |
|
|   |
|
|
|   |
|
|   |   |   |   |   |   |
| . | . |
|   |   |
|   |
|   |   |   |
|   |   |   |   |   |   |   | . | . | . | . |
|   |   |   |   |   |   |
Template Sequence |   |
G | V | D | N | I | D | M | D | K | A | K | E | L | G | F | Q | I | T | N | V | P | V | Y | S | Y | T | T | H | A | . |
. |
V | R | N | M | V | V | K | A | F | N | N | N | L | K | L | I | N | . |
. |
. |
. |
G | E | K | P | D | S | P |
Template Known Secondary structure |   |
|
| T | T | B |
|  |  |  |  |  |  | T | T |
| B |
| B |
|
|
|
|
|
|
|
|  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | T |
|
|
| S | S | B |
Template Predicted Secondary structure |   |
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|  |  |  |  |
|
|
|
|
|  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
| . | . | . | . |
|
|
|
|
|
|  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | |
|
. | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | |
|
|
|
. | . | . | . | 130 | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|