 |
Job Description | P37666 | Confidence | 96.71% | Date | Thu Jan 5 11:56:40 GMT 2012 |
Rank | 310 | Aligned Residues | 112 |
% Identity | 13% | Template | d1llca1 |
SCOP info | NAD(P)-binding Rossmann-fold domains
| NAD(P)-binding Rossmann-fold domains
| LDH N-terminal domain-like
|
Resolution | 3.00 |
|
 |
  |   |
146 | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | |
|
. | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | |
|
|
|
|
|
|
|
|
|
|
. | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . |
Predicted Secondary structure |   |
|  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
| . | . |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |
|
|
|  |  |
| . | . | . | . | . | . | . | . | . | . | . |
|  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
K | T | L | G | I | V | G | M | G | R | I | G | M | A | L | A | Q | R | A | H | F | G | F | N | M | . |
. |
P | I | L | Y | N | A | R | R | H | H | K | E | A | E | E | R | F | N | A | R | Y | C | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
D | L | D | T | L | L | Q | E | S | D | F | V | C | L | I | L | P | L | T | D |
Query Conservation |   |
|
|
|
|
|
|
|   |
|   |
|
|   |   |
|
|   |   |
|   |   |
|
|
|   | . | . |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   | . | . | . | . | . | . | . | . | . | . | . |   |
|   |
|
|
|   |   |
|
|
|
|   |   |   |
|
|
|
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
Template Conservation |   |
  |
|
|
|
|
|
|
|
|   |
|
|   |   |
|
|   |   |
|   | . |   |   |   |   |   |   |
|
|   |
|   |
|   |   |   |   |   |
|   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |
|   |   |   |
|
|
|
|
|
|   |   | . |   |   |   |
Template Sequence |   |
Q | K | V | I | L | V | G | D | G | A | V | G | S | S | Y | A | F | A | M | V | . |
L | Q | G | I | A | Q | E | I | G | I | V | D | I | F | K | D | K | T | K | G | D | A | I | D | L | S | N | A | L | P | F | T | S | P | K | K | I | Y | S | A | E | Y | S | D | A | K | D | A | D | L | V | V | I | T | A | . |
G | A | P |
Template Known Secondary structure |   |
|
|  |  |  | S |
| T | T |  |  |  |  |  |  |  |  |  |  |  | . |  |  | T |
|
| S | S |  |  |  |
|
| S |
| S |  |  |  |  |  |  |  |  |  |  | T | T | S |
| T | T | S |
|
|
|
| B |
|
|
| T | T | T | T | T | S | S |
| S |  |  |  |
| B | T | . |
|
|
|
Template Predicted Secondary structure |   |
|  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  | . |  |
|
|
|
|
|  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |
|
|
|  |  |  |  |
|
|
|
|  |  |  |  |  |
| . |
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
22 | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | |
. | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | |
. | . | . |
  |
  |   |
213 | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
|
220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | |
|
250 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  | . | . |  |  |
|
|
|  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
E | T | H | H | L | F | G | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
A | E | Q | F | A | K | M | K | S | S | A | I | F | I | N | A | G | R | G | P | V | V | D | E | N | A | L | I | A | A | . |
. |
L | Q | K | G | E | I | H | A | A | G |
Query Conservation |   |
  |
|   |   |
|
|   | . | . | . | . | . | . | . | . | . | . | . | . | . | . |   |   |   |
|   |   |
|
|   |
|
|   |
|
|
|   |
|
|
|   |
|
|
|
|   |
|
|   |   |
| . | . |
|   |   |
|   |
|   |
|
|
|
Alig confidence |   |
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |
|   |   |   |
|   |   |   |   |
|   |   |   |
|
|   |   |
|
|
|   |   |   |   |   |   |   |   |   |   |   |
|
|   |
|   |   |
|
|   |
|   |
|
Template Sequence |   |
K | Q | P | G | E | T | R | L | D | L | V | N | K | N | L | K | I | L | K | S | I | V | D | P | I | V | D | S | G | F | N | L | I | F | L | V | A | A | N | P | V | D | I | L | T | Y | A | T | W | K | L | S | G | F | P | K | N | R | V | V | G | S | G |
Template Known Secondary structure |   |
S | S |
| S | S | S |
| S | T |  |  |  |  | T | T | S | T | T | T | T | T | T |  |  |  |  |  | T | T |
|
| S |  |  |  |
| B |
| S | S |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
| T | T | T |  |  |
|
|
|
Template Predicted Secondary structure |   |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
102 | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|