Job Description P37666 Confidence 96.78% Date Thu Jan 5 11:56:40 GMT 2012 Rank 299 Aligned Residues 122 % Identity 18% Template c3tozA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:shikimate dehydrogenase; PDBTitle: 2.2 angstrom crystal structure of shikimate 5-dehydrogenase from2 listeria monocytogenes in complex with nad. Resolution 2.20 Å

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		140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170		.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.																		190	.	.	.	.	.	.	.	.	.	200	.
Predicted Secondary structure																																	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		G	T	D	V	H	H	K	T	L	G	I	V	G	M	G	R	I	G	M	A	L	A	Q	R	A	H	F	G	F	N	M	.	P	I	L	Y	N	A	R	R	H	H	K	E	A	E	E	R	F	N	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	Y	C	D	L	D	T	L	L	Q	E	S
Query Conservation																																	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																												.					.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																												.
Template Sequence		G	H	D	I	I	G	K	K	M	T	I	C	G	A	G	G	A	A	T	A	I	C	I	Q	A	A	.	L	D	G	V	K	E	I	S	I	F	N	R	K	D	D	F	Y	A	N	A	E	K	T	V	E	K	I	N	S	K	T	D	C	K	A	Q	L	F	D	I	E	D	H	E	Q	L	R	K	E	I	A	E	S
Template Known Secondary structure		T				T	T	S								S												.			T										S	S	T	T															S	S								T	T											T
Template Predicted Secondary structure																												.
Template SS confidence
		125	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150		.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.
		202	.	.	.	.	.	.	.	210	.	.	.	.		.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.
Predicted Secondary structure															.
Query SS confidence															.
Query Sequence		D	F	V	C	L	I	L	P	L	T	D	E	T	.	H	H	L	F	G	A	E	Q	F	A	K	M	K	S	S	A	I	F	I	N	A	G	R	G	P	V	V	D	E	N	A	L	I	A	A	L	Q	K	G	E	I	H	A	A	G	L	D	V	F
Query Conservation															.
Alig confidence															.																										.
Template Conservation																																									.
Template Sequence		V	I	F	T	N	A	T	G	V	G	M	K	P	F	E	G	E	T	L	L	P	S	A	D	M	L	R	P	E	L	I	V	S	D	V	V	Y	K	P	.	T	K	T	R	L	L	E	I	A	E	E	Q	G	C	Q	T	L	N	G	L	G	M	M
Template Known Secondary structure		S						S	S	T	T	S	T	T	S	T	T			S				G	G	G			T	T						S			S	S	.	S	S										T	T						T
Template Predicted Secondary structure																																									.
Template SS confidence
		204	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.		.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions