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Job DescriptionP37666
Confidence99.95%DateThu Jan 5 11:56:40 GMT 2012
Rank50Aligned Residues230
% Identity13%Templatec3p2yA_
PDB info PDB header:oxidoreductaseChain: A: PDB Molecule:alanine dehydrogenase/pyridine nucleotide transhydrogenase; PDBTitle: crystal structure of alanine dehydrogenase/pyridine nucleotide2 transhydrogenase from mycobacterium smegmatis
Resolution1.82 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  ALPDDLLQRLQEHFTVHQVAN. . . . LSPQTVEQNAA. . . . . . IFAEAEGLLGSNENVNAALLEKMPKLRATSTISVGYDN
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Template Sequence  ALVPKVVEKLSARGLEVVVESAAGAGALFSDADYERAGATIGDPWPADVVVKVNPPTSDEISQLKPGSVLIGFLAPRTQP
Template Known Secondary structure  SS
TT

TTTTGGGT

TT
S

TTSS
SS


TTS
TT



TTT
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Query Sequence  FDVDALTARKILLMHTPTVLTETVAD. . TLMALVLSTARRVVEVAERVKAGEWTASIGPDWYGTDVHHKTLGIVGMGRIG
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Template Sequence  ELASRLRIADVTAFAMESIPRISRAQTMDALSSQANVAGYKAVLLGASLSTRFVPMLTTAAGT. . VKPASALVLGVGVAG
Template Known Secondary structure  TT
GGG

SSGGGGGG

SS
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S
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Query Sequence  MALAQRAHFGFNMPILYNARRHHKE. AEERFNARYCD. . . . . . . . . . . . . LDTLLQESDFVCLILPL. TDETHHLFGAEQ
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Template Sequence  LQALATAK. RLGAKTTGYDVRPEVAEQVRSVGAQWLDLGSEAERAQQQQALEDAITKFDIVITTALVPGRPAPRLVTAAA
Template Known Secondary structure  .T

SSGGGTT





TT
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TTS




B
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   176...180... ......190.........200.........210.........220.........230.........240.........250....
 
   223......230...... ...240..
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Query Sequence  FAKMKSSAIFINAG. . RGPVVD
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Template Sequence  ATGMQPGSVVVDLAGETGGNCE
Template Known Secondary structure  TS
TT
TTGGGT
SBT
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   268.270.........280.........
 
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No model constructed - rank, confidence too low




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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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