Job Description P37666 Confidence 94.95% Date Thu Jan 5 11:56:40 GMT 2012 Rank 482 Aligned Residues 91 % Identity 14% Template c3l4bG_ PDB info PDB header:transport protein Chain: G: PDB Molecule:trka k+ channel protien tm1088b; PDBTitle: crystal structure of an octomeric two-subunit trka k+ channel ring2 gating assembly, tm1088a:tm1088b, from thermotoga maritima Resolution 3.45 Å

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		146	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180											.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.		.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.
Predicted Secondary structure																																					.	.	.	.	.	.	.	.	.	.																		.
Query SS confidence																																					.	.	.	.	.	.	.	.	.	.																		.
Query Sequence		K	T	L	G	I	V	G	M	G	R	I	G	M	A	L	A	Q	R	A	H	F	G	F	N	M	P	I	L	Y	N	A	R	R	H	H	.	.	.	.	.	.	.	.	.	.	K	E	A	E	E	R	F	N	A	R	Y	C	D	L	D	T	L	.	L	Q	E	S	D	F	V	C	L	I	L	P	L	T	D	E	T
Query Conservation																																					.	.	.	.	.	.	.	.	.	.																		.
Alig confidence																						.															.	.	.	.	.	.	.	.	.	.																		.													.	.
Template Conservation																						.																																																							.	.
Template Sequence		M	K	V	I	I	I	G	G	E	T	T	A	Y	Y	L	A	R	S	M	L	.	S	R	K	Y	G	V	V	I	I	N	K	D	R	E	L	C	E	E	F	A	K	K	L	K	A	T	I	I	H	G	D	G	S	H	K	E	I	L	R	D	A	E	V	S	K	N	D	V	V	V	I	L	T	P	.	.	R	D	E
Template Known Secondary structure																						.		T	T								S												S	S	S					S		T	T	S								T			T	T								S	.	.
Template Predicted Secondary structure																						.																																																							.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20		.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.			.	.	.
		215	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	H	L	F	G	A	E	Q	F	A	K	M	K	S	S	A	I	F	I	N	A	G	R	G	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	N	L	F	I	A	Q	L	V	M	K	D	F	G	V	K	R	V	V	S	L	V	N	D	P
Template Known Secondary structure													T	S											S	G
Template Predicted Secondary structure
Template SS confidence
		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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