Job Description P37666 Confidence 100.00% Date Thu Jan 5 11:56:40 GMT 2012 Rank 26 Aligned Residues 299 % Identity 22% Template c3kboB_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:glyoxylate/hydroxypyruvate reductase a; PDBTitle: 2.14 angstrom crystal structure of putative oxidoreductase (ycdw) from2 salmonella typhimurium in complex with nadp Resolution 2.14 Å

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		5	.	.	.	.	10	.	.	.			.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
Predicted Secondary structure											.	.
Query SS confidence											.	.
Query Sequence		V	I	L	Y	K	A	L	P	D	.	.	D	L	L	Q	R	L	Q	E	H	F	T	V	H	Q	V	A	N	L	S	P	Q	T	V	E	Q	N	A	A	I	F	A	E	A	E	G	L	L	G	S	N	E	N	V	N	A	A	L	L	E	K	M	P	K	L	R	A	T	S	T	I	S	V	G	Y	D	N	F	D	V
Query Conservation											.	.
Alig confidence											.	.																								.	.	.	.	.	.	.										.	.									.
Template Conservation																																				.	.	.	.	.	.	.										.	.									.
Template Sequence		I	I	F	Y	H	P	T	F	N	A	A	W	W	V	N	A	L	E	K	A	L	P	H	A	R	V	R	E	W	K	V	G	D	N	.	.	.	.	.	.	.	N	P	A	D	Y	A	L	V	W	.	.	Q	P	P	V	E	X	L	A	.	G	R	R	L	K	A	V	F	V	L	G	A	G	V	D	A	I	L	S
Template Known Secondary structure							S	S	S														T	T								T	T			.	.	.	.	.	.	.	S			S					S	.	.	S							T	.	T				S					S	S	S
Template Predicted Secondary structure																																				.	.	.	.	.	.	.										.	.									.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.								.	.	.	40	.	.	.	.	.			.	.	.	.	50	.	.	.		.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.
		83	.	.	.	.	.	.	90	.	.	.	.	.	.							.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
Predicted Secondary structure																.	.	.	.	.	.
Query SS confidence																.	.	.	.	.	.
Query Sequence		D	A	L	T	A	R	K	I	L	L	M	H	T	P	.	.	.	.	.	.	T	V	L	T	E	T	V	A	D	T	L	M	A	L	V	L	S	T	A	R	R	V	V	E	V	A	E	R	V	K	A	G	E	W	T	A	S	I	G	P	D	W	Y	G	T	D	V	H	H	K	T	L	G	I	V	G	M	G	R	I
Query Conservation																.	.	.	.	.	.
Alig confidence																.	.	.	.	.	.																																								.	.	.	.	.
Template Conservation																																																													.	.	.	.	.
Template Sequence		K	L	N	A	H	P	E	X	L	D	A	S	I	P	L	F	R	L	E	D	T	G	X	G	L	Q	X	Q	E	Y	A	V	S	Q	V	L	H	W	F	R	R	F	D	D	Y	Q	A	L	K	N	Q	A	L	W	K	P	L	P	E	.	.	.	.	.	Y	T	R	E	E	F	S	V	G	I	X	G	A	G	V	L
Template Known Secondary structure							T	T	S	S		T	T	S								T	T																		T	T									T	T	T								.	.	.	.	.			S	T	T									S
Template Predicted Secondary structure																																																													.	.	.	.	.
Template SS confidence
		73	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.						.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.
		157	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	M	A	L	A	Q	R	A	H	F	G	F	N	M	P	I	L	Y	N	A	R	R	H	H	K	E	A	E	E	R	F	N	A	R	Y	C	D	L	D	T	L	L	Q	E	S	D	F	V	C	L	I	L	P	L	T	D	E	T	H	H	L	F	G	A	E	Q	F	A	K	M	K	S	S	A	I	F	I	N	A	G
Query Conservation
Alig confidence											.
Template Conservation											.
Template Sequence		G	A	K	V	A	E	S	L	Q	.	A	W	G	F	P	L	R	C	W	S	R	S	R	K	S	W	P	G	V	E	S	Y	V	G	R	E	E	L	R	A	F	L	N	Q	T	R	V	L	I	N	L	L	P	N	T	A	Q	T	V	G	I	I	N	S	E	L	L	D	Q	L	P	D	G	A	Y	V	L	N	L	A
Template Known Secondary structure											.	T	T	T								S	S					T	T						S	T	T	T							T		S										T	T	T	T	T		B	S						T	S		T	T							S
Template Predicted Secondary structure											.
Template SS confidence
		148	.	150	.	.	.	.	.	.		.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.
		237	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	G	P	V	V	D	E	N	A	L	I	A	A	L	Q	K	G	E	I	H	A	A	G	L	D	V	F	E	Q	E	P	L	S	V	D	S	P	L	L	S	M	A	N	V	V	A	V	P	H	I	G	S	A	T	H	E	T	R	Y	G	M	A	A	C	A	V	D	N	L	I	D	A	L	Q	G	K	V	E	K	N
Query Conservation
Alig confidence																																																										.	.
Template Conservation																																																										.	.
Template Sequence		R	G	V	H	V	Q	E	A	D	L	L	A	A	L	D	S	G	K	L	K	G	A	X	L	D	V	F	S	Q	E	P	L	P	Q	E	S	P	L	W	R	H	P	R	V	A	X	T	P	H	I	A	A	V	T	R	P	.	.	A	E	A	I	D	Y	I	S	R	T	I	T	Q	L	E	K	G	E	P	V	T	G
Template Known Secondary structure			G	G	G	B												T	S							S			S	S	S	S			T	T		T	T	T	T		T	T					S	S		S						.	.																T	T				S
Template Predicted Secondary structure																																																										.	.
Template SS confidence
		227	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.			.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.
		317	.	.	320	.
Predicted Secondary structure
Query SS confidence
Query Sequence		C	V	N	P	H
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Q	V	D	R	A
Template Known Secondary structure					T	T
Template Predicted Secondary structure
Template SS confidence
		305	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions