Job Description P37666 Confidence 100.00% Date Thu Jan 5 11:56:40 GMT 2012 Rank 24 Aligned Residues 306 % Identity 28% Template c3hg7A_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:d-isomer specific 2-hydroxyacid dehydrogenase family PDBTitle: crystal structure of d-isomer specific 2-hydroxyacid dehydrogenase2 family protein from aeromonas salmonicida subsp. salmonicida a449 Resolution 1.80 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.		.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure																							.
Query SS confidence																							.
Query Sequence		K	P	S	V	I	L	Y	K	A	L	P	D	D	L	L	Q	R	L	Q	E	H	.	F	T	V	H	Q	V	A	N	L	S	P	Q	T	V	E	Q	N	A	A	I	F	A	E	A	E	G	L	L	G	S	N	E	N	V	N	A	A	L	L	E	K	M	P	K	L	R	A	T	S	T	I	S	V	G	Y	D	N	F
Query Conservation																							.
Alig confidence																							.							.	.																							.																										.
Template Conservation																														.	.																							.																										.
Template Sequence		Q	R	T	L	L	L	L	S	Q	D	N	A	H	Y	E	R	L	L	K	A	A	H	L	P	H	L	R	I	.	.	L	R	A	D	N	Q	S	D	A	E	K	L	I	G	E	A	H	I	L	M	A	E	.	P	A	R	A	K	P	L	L	A	K	A	N	K	L	S	W	F	Q	S	T	Y	A	G	V	D	.	V
Template Known Secondary structure									S	T	T											S			T	T				.	.				S	S								G	G	G		S						.					G	G	G	G	G	G		T	T							S	S	S			G	.	G
Template Predicted Secondary structure																														.	.																							.																										.
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.			.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.		.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.		80
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure
Query SS confidence
Query Sequence		D	V	D	A	L	T	A	R	K	I	L	L	M	H	T	P	T	V	L	T	E	T	V	A	D	T	L	M	A	L	V	L	S	T	A	R	R	V	V	E	V	A	E	R	V	K	A	G	E	W	T	A	S	I	G	P	D	W	Y	G	T	D	V	H	H	K	T	L	G	I	V	G	M	G	R	I	G	M	A	L
Query Conservation
Alig confidence																																																									.	.	.	.	.
Template Conservation																																																									.	.	.	.	.
Template Sequence		L	L	D	A	R	C	R	R	D	Y	Q	L	T	N	V	R	G	I	F	G	P	L	M	S	E	Y	V	F	G	H	L	L	S	L	M	R	Q	L	P	L	Y	R	E	Q	Q	K	Q	R	L	W	Q	S	H	P	Y	.	.	.	.	.	Q	G	L	K	G	R	T	L	L	I	L	G	T	G	S	I	G	Q	H	I
Template Known Secondary structure		G	S		T	T	S			S	S							S																			T	T										T	T								.	.	.	.	.			S	T	T									S
Template Predicted Secondary structure																																																									.	.	.	.	.
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.						.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
Predicted Secondary structure
Query SS confidence
Query Sequence		A	Q	R	A	H	F	G	F	N	M	P	I	L	Y	N	A	R	R	H	H	K	E	A	E	E	R	F	N	A	R	Y	C	D	L	D	T	L	L	Q	E	S	D	F	V	C	L	I	L	P	L	T	D	E	T	H	H	L	F	G	A	E	Q	F	A	K	M	K	S	S	A	I	F	I	N	A	G	R	G	P	V
Query Conservation
Alig confidence							.
Template Conservation							.
Template Sequence		A	H	T	G	K	.	H	F	G	M	K	V	L	G	V	S	R	S	G	R	E	R	A	G	F	D	Q	V	Y	Q	L	P	A	L	N	K	M	L	A	Q	A	D	V	I	V	S	V	L	P	A	T	R	E	T	H	H	L	F	T	A	S	R	F	E	H	C	K	P	G	A	I	L	F	N	V	G	R	G	N	A
Template Known Secondary structure							.		T	T								S	S					T	T		S					G	G	G							T		S										S	S	S	T	T	S	B		T	T	T	T	T		S		T	T							S		G	G	G
Template Predicted Secondary structure							.
Template SS confidence
		156	.	.	.	160		.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.
		241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	D	E	N	A	L	I	A	A	L	Q	K	G	E	I	H	A	A	G	L	D	V	F	E	Q	E	P	L	S	V	D	S	P	L	L	S	M	A	N	V	V	A	V	P	H	I	G	S	A	T	H	E	T	R	Y	G	M	A	A	C	A	V	D	N	L	I	D	A	L	Q	G	K	V	E	K	N	C	V	N
Query Conservation
Alig confidence																																																						.	.
Template Conservation																																																						.	.
Template Sequence		I	N	E	G	D	L	L	T	A	L	R	T	G	K	L	G	M	A	V	L	D	V	F	E	Q	E	P	L	P	A	D	S	P	L	W	G	Q	P	N	L	I	I	T	P	H	N	S	A	Y	S	F	P	.	.	D	D	V	A	Q	I	F	V	R	N	Y	I	R	F	I	D	G	Q	P	L	D	G	K	I	D
Template Known Secondary structure		B											T	T	S	S	S					S			S	S	S	S			T	T		T	T	T	T		T	T						S		S	S					.	.																T	T				T	T	B
Template Predicted Secondary structure																																																						.	.
Template SS confidence
		235	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.			.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions