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Job DescriptionP37666
Confidence96.55%DateThu Jan 5 11:56:40 GMT 2012
Rank327Aligned Residues160
% Identity15%Templatec3h9gA_
PDB info PDB header:transferase/antibioticChain: A: PDB Molecule:mccb protein; PDBTitle: crystal structure of e. coli mccb + mcca-n7isoasn
Resolution2.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   143......150.........160.........170 .........180.......
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Query Sequence  VHHKTLGIVGMGRIGMALAQRAHFGFNM. PILYNARRHHKEAEERF. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
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Template Sequence  LKNAKVVILGCGGIGNHVSVILA. TSGIGEIILIDNDQIENTNLTRQVLFSEDDVGKNKTEVIKRELLKRNSEISVSEIA
Template Known Secondary structure  T


S.TT
S


B

SGGGGT
TT

GGGTTSB
TTS
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   113......120.........130..... ....140.........150.........160.........170.........180.........190.
 
   188.190.........200.........210.........220.........230.........240.........250.........260
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Query Sequence  . NARYCDLDTLLQESDFVCLILPLTDETHHLFGAEQFAKMKSSAIFINAGRGPVVDENALIAALQKGEIHAAGL. . . . . .
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Template Sequence  LNINDYTDLHKVPEADIWVVSADHPFNLINWVNKYCVRANQP. . . YINAGY. . . . . . . . . . . . . . VNDIAVFGPLYVPGK
Template Known Secondary structure 


SSGGGGGGS


S



STTT

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TTT
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   192.......200.........210.........220.........230... ...... 240.........250....
 
   261........270.........280.........290.........300.........310.........320
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Query Sequence  . . . . . . . DVFEQEPLSVDSPLLSMANVVAVPHIGSATHETRYGMAACAVDNLIDALQGKVEKNCVNP
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Template Sequence  TGCYECQKVVADLYGSEKENIDHKIKLINSRFKPATFAPVNNVAAALCAADVIKFIGKYSEPLSLNK
Template Known Secondary structure  S

TTSS

S

SS

SST






SS

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   255....260.........270.........280.........290.........300.........310.........320.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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