Job Description P37666 Confidence 100.00% Date Thu Jan 5 11:56:40 GMT 2012 Rank 15 Aligned Residues 319 % Identity 29% Template c3gg9C_ PDB info PDB header:oxidoreductase Chain: C: PDB Molecule:d-3-phosphoglycerate dehydrogenase oxidoreductase protein; PDBTitle: crystal structure of putative d-3-phosphoglycerate dehydrogenase2 oxidoreductase from ralstonia solanacearum Resolution 1.90 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.		.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.			.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.			.	.
Predicted Secondary structure																									.																													.	.																							.	.
Query SS confidence																									.																													.	.																							.	.
Query Sequence		M	K	P	S	V	I	L	Y	K	A	L	P	D	D	L	L	Q	R	L	Q	E	H	F	.	T	V	H	Q	V	A	N	L	S	P	Q	T	V	E	Q	N	A	A	I	F	A	E	A	E	G	L	L	G	.	.	S	N	E	N	V	N	A	A	L	L	E	K	M	P	K	L	R	A	T	S	T	I	.	.	S	V
Query Conservation																									.																													.	.																							.	.
Alig confidence																									.																													.	.																							.	.
Template Conservation
Template Sequence		L	K	I	A	V	L	D	D	Y	Q	D	A	V	R	K	L	D	C	F	S	L	L	Q	D	H	E	V	K	V	F	N	N	T	V	K	G	V	G	Q	L	A	A	R	V	A	D	V	E	A	L	V	L	I	R	E	R	T	R	V	T	R	Q	L	L	D	R	L	P	K	L	K	I	I	S	Q	T	G	R	V	S
Template Known Secondary structure										T	T			G	G	G	S	G	G	G	G	G	G	T	T	S							S				S								T	T	T		S						T	T	S	S		B						T	T		T	T							S	S
Template Predicted Secondary structure
Template SS confidence
		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.
		76	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.								.	140	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																	.	.	.	.	.	.	.
Query SS confidence																																																																	.	.	.	.	.	.	.
Query Sequence		G	Y	D	N	F	D	V	D	A	L	T	A	R	K	I	L	L	M	H	T	P	T	V	L	T	E	T	V	A	D	T	L	M	A	L	V	L	S	T	A	R	R	V	V	E	V	A	E	R	V	K	A	G	E	W	T	A	S	I	G	P	D	W	.	.	.	.	.	.	.	Y	G	T	D	V	H	H	K	T	L
Query Conservation																																																																	.	.	.	.	.	.	.
Alig confidence																								.																																									.	.	.	.	.	.	.
Template Conservation																								.
Template Sequence		R	D	G	H	I	D	L	E	A	C	T	D	K	G	V	V	V	L	E	G	K	G	.	S	P	V	A	P	A	E	L	T	W	A	L	V	M	A	A	Q	R	R	I	P	Q	Y	V	A	S	L	K	H	G	A	W	Q	Q	S	G	L	K	S	T	T	M	P	P	N	F	G	I	G	R	V	L	K	G	Q	T	L
Template Known Secondary structure						B								T	T									.		S																T	T										T	T		T	T							T	T	S		T	T	T	T	S					T	T
Template Predicted Secondary structure																								.
Template SS confidence
		92	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.		.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170
		149	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.		.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.
Predicted Secondary structure																																														.
Query SS confidence																																														.
Query Sequence		G	I	V	G	M	G	R	I	G	M	A	L	A	Q	R	A	H	F	G	F	N	M	P	I	L	Y	N	A	R	R	H	H	K	E	A	E	E	R	F	N	A	R	Y	C	.	D	L	D	T	L	L	Q	E	S	D	F	V	C	L	I	L	P	L	T	D	E	T	H	H	L	F	G	A	E	Q	F	A	K	M	K
Query Conservation																																														.
Alig confidence																			.																											.
Template Conservation																			.
Template Sequence		G	I	F	G	Y	G	K	I	G	Q	L	V	A	G	Y	G	R	.	A	F	G	M	N	V	L	V	W	G	R	E	N	S	K	E	R	A	R	A	D	G	F	A	V	A	E	S	K	D	A	L	F	E	Q	S	D	V	L	S	V	H	L	R	L	N	D	E	T	R	S	I	I	T	V	A	D	L	T	R	M	K
Template Known Secondary structure							S												.		T	T								S										T	T					S										S									S	T	T	T	T	T		B						T	T	S
Template Predicted Secondary structure																			.
Template SS confidence
		173	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.		190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.
		228	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	S	A	I	F	I	N	A	G	R	G	P	V	V	D	E	N	A	L	I	A	A	L	Q	K	G	E	I	H	A	A	G	L	D	V	F	E	Q	E	P	L	S	V	D	S	P	L	L	S	M	A	N	V	V	A	V	P	H	I	G	S	A	T	H	E	T	R	Y	G	M	A	A	C	A	V	D	N	L	I	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		P	T	A	L	F	V	N	T	S	R	A	E	L	V	E	E	N	G	M	V	T	A	L	N	R	G	R	P	G	M	A	A	I	D	V	F	E	T	E	P	I	L	Q	G	H	T	L	L	R	M	E	N	C	I	C	T	P	H	I	G	Y	V	E	R	E	S	Y	E	M	Y	F	G	I	A	F	Q	N	I	L	D
Template Known Secondary structure		T	T							S		G	G	G	B		T	T									T	S	S	S								S	S	S	S			T	T		T	T	T	T		T	T						S		T	T		S
Template Predicted Secondary structure
Template SS confidence
		252	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.
		308	.	310	.	.	.	.	.	.	.	.	.	320	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	L	Q	G	K	V	E	K	N	C	V	N	P	H	V
Query Conservation
Alig confidence							.
Template Conservation							.
Template Sequence		I	L	Q	G	N	.	V	D	S	V	A	N	P	T	A
Template Known Secondary structure			T	T	T		.		T	T	B	S		G	G	G
Template Predicted Secondary structure							.
Template SS confidence
		332	.	.	.	.		.	.	.	340	.	.	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions