Job Description P37666 Confidence 100.00% Date Thu Jan 5 11:56:40 GMT 2012 Rank 19 Aligned Residues 316 % Identity 21% Template c2j6iC_ PDB info PDB header:oxidoreductase Chain: C: PDB Molecule:formate dehydrogenase; PDBTitle: candida boidinii formate dehydrogenase (fdh) c-terminal2 mutant Resolution 1.55 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.				.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.
Predicted Secondary structure																																																							.	.	.
Query SS confidence																																																							.	.	.
Query Sequence		M	K	P	S	V	I	L	Y	K	A	L	P	D	D	L	L	Q	R	L	Q	E	H	F	T	V	H	Q	V	A	N	L	S	P	Q	T	V	E	Q	N	A	A	I	F	A	E	A	E	G	L	L	G	S	N	.	.	.	E	N	V	N	A	A	L	L	E	K	M	P	K	L	R	A	T	S	T	I	S	V	G	Y
Query Conservation																																																							.	.	.
Alig confidence																																			.																				.	.	.
Template Conservation																																			.
Template Sequence		D	E	E	K	L	Y	G	C	T	E	N	K	L	G	I	A	N	W	L	K	D	Q	G	H	E	L	I	T	T	S	D	K	E	.	G	N	S	V	L	D	Q	H	I	P	D	A	D	I	I	I	T	T	P	F	H	P	A	Y	I	T	K	E	R	I	D	K	A	K	K	L	K	L	V	V	V	A	G	V	G	S
Template Known Secondary structure		T		T	T		T	T	B	T	T	T	G	G	G								T	T							S				.									G	G	G		S						T	T	S				B									T	T							S	S	S
Template Predicted Secondary structure																																			.
Template SS confidence
		16	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.		.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.
		78	.	80	.	.	.	.	.	.	.	.	.			90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.
Predicted Secondary structure														.	.
Query SS confidence														.	.
Query Sequence		D	N	F	D	V	D	A	L	T	A	R	K	.	.	I	L	L	M	H	T	P	T	V	L	T	E	T	V	A	D	T	L	M	A	L	V	L	S	T	A	R	R	V	V	E	V	A	E	R	V	K	A	G	E	W	T	A	S	I	G	P	D	W	Y	G	T	D	V	H	H	K	T	L	G	I	V	G	M	G	R
Query Conservation														.	.
Alig confidence														.	.																																										.
Template Conservation																																																									.
Template Sequence		D	H	I	D	L	D	Y	I	N	Q	T	G	K	K	I	S	V	L	E	V	T	G	S	N	V	V	S	V	A	E	H	V	V	M	T	M	L	V	L	V	R	N	F	V	P	A	H	E	Q	I	I	N	H	D	W	.	E	V	A	A	I	A	K	D	A	Y	D	I	E	G	K	T	I	A	T	I	G	A	G	R
Template Known Secondary structure		T	T	B									T									T	T	S	S																	T	T										T	T			.							T	T				S	T	T									S
Template Predicted Secondary structure																																																									.
Template SS confidence
		96	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150		.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.
		156	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.				.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.
Predicted Secondary structure																																		.	.	.
Query SS confidence																																		.	.	.
Query Sequence		I	G	M	A	L	A	Q	R	A	H	F	G	F	N	M	P	I	L	Y	N	A	R	R	H	H	K	E	A	E	E	R	F	.	.	.	N	A	R	Y	C	D	L	D	T	L	L	Q	E	S	D	F	V	C	L	I	L	P	L	T	D	E	T	H	H	L	F	G	A	E	Q	F	A	K	M	K	S	S	A	I	F
Query Conservation																																		.	.	.
Alig confidence												.																						.	.	.
Template Conservation												.
Template Sequence		I	G	Y	R	V	L	E	R	L	V	.	P	F	N	P	K	E	L	L	Y	Y	D	Y	Q	A	L	P	K	D	A	E	E	K	V	G	A	R	R	V	E	N	I	E	E	L	V	A	Q	A	D	I	V	T	V	N	A	P	L	H	A	G	T	K	G	L	I	N	K	E	L	L	S	K	F	K	K	G	A	W	L
Template Known Secondary structure											G	.	G	G			S							S	S											T					S	S									S									S	T	T	T	T	T		B						T	T	S		T	T
Template Predicted Secondary structure												.
Template SS confidence
		175	.	.	.	.	180	.	.	.	.		.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.
		233	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.						.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.
Predicted Secondary structure																																																			.	.	.	.	.
Query SS confidence																																																			.	.	.	.	.
Query Sequence		I	N	A	G	R	G	P	V	V	D	E	N	A	L	I	A	A	L	Q	K	G	E	I	H	A	A	G	L	D	V	F	E	Q	E	P	L	S	V	D	S	P	L	L	S	M	A	N	V	V	.	.	.	.	.	A	V	P	H	I	G	S	A	T	H	E	T	R	Y	G	M	A	A	C	A	V	D	N	L	I	D
Query Conservation																																																			.	.	.	.	.
Alig confidence																																																			.	.	.	.	.
Template Conservation
Template Sequence		V	N	T	A	R	G	A	I	C	V	A	E	D	V	A	A	A	L	E	S	G	Q	L	R	G	Y	G	G	D	V	W	F	P	Q	P	A	P	K	D	H	P	W	R	D	M	R	N	K	Y	G	A	G	N	A	M	T	P	H	Y	S	G	T	T	L	D	A	Q	T	R	Y	A	Q	G	T	V	N	I	L	E	S
Template Known Secondary structure					S		G	G	G	B												T	S							S			S	S	S	S			T	T									T	T	S								S		G	G	G	S
Template Predicted Secondary structure
Template SS confidence
		254	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.
		308	.	310	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	L	Q	G	K	V	E	K	N	C	V	N
Query Conservation
Alig confidence
Template Conservation
Template Sequence		F	F	T	G	K	F	D	Y	R	P	Q	D
Template Known Secondary structure				T	S						G	G	G
Template Predicted Secondary structure
Template SS confidence
		334	.	.	.	.	.	340	.	.	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions