Return to main results Retrieve Phyre Job Id

Job DescriptionP37666
Confidence98.62%DateThu Jan 5 11:56:40 GMT 2012
Rank110Aligned Residues156
% Identity13%Templatec2g5cD_
PDB info PDB header:oxidoreductaseChain: D: PDB Molecule:prephenate dehydrogenase; PDBTitle: crystal structure of prephenate dehydrogenase from aquifex aeolicus
Resolution1.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   145....150.........160.........170 .........180........ .190.........200.........210.......
Predicted Secondary structure 








..








.....














Query SS confidence 

























. .

















. . . . .




























Query Sequence  HKTLGIVGMGRIGMALAQRAHFGFNM. . PILYNARRHHKEAEERFN. . . . . ARYCDLDTLLQESDFVCLILPLTDETHHL
Query Conservation 







 
 

  

  
  


 .. 
                .....     
 


  



   



  
  
Alig confidence 




















.



..

















.....




























Template Conservation   


 


 
 

  

  
 .  
    
   

                             






       
 
Template Sequence  XQNVLIVGVGFXGGSFAKSLR. RSGFKGKIYGYDINPESISKAVDLGIIDEGTTSIAKVEDFSPDFVXLSSPVRTFREIA
Template Known Secondary structure 

S
S.TT

S
S
TTS
SS
GGGGGGG

S
S
GGG
Template Predicted Secondary structure 




.


























Template SS confidence 















































































   30.........40.........50 .........60.........70.........80.........90.........100........
 
   218.220.........230.........240.........250.........260.........270.........280.........290.......
Predicted Secondary structure 







































Query SS confidence 















































































Query Sequence  FGAEQFAKMKSSAIFINAGRGPVVDENALIAALQKGEIHAAGLDVFEQEPLSVDSPLLSMANVVAVPHIGSATHETRYGM
Query Conservation 
    
  

 

 


 


 



 

  

  
 
 





   


    

    






 
  
       
Alig confidence  ..













































































Template Conservation  ..  
        

 
 

                    


 
                    
              
Template Sequence  . . KKLSYILSEDATVTDQGSVKGKLVYDLENILGKRFVGGHPIAGTEKSGVEYSLDNLYEGKKVILTPTKKTDKKRLKLV
Template Known Secondary structure  ..S
TT


S

TGGG




S

SGGG

SSTTTT



TTS
Template Predicted Secondary structure  ..







































Template SS confidence 















































































   109110.........120.........130.........140.........150.........160.........170.........180......
 
   298.300...
Predicted Secondary structure 
Query SS confidence 





Query Sequence  AACAVD
Query Conservation        
Alig confidence 





Template Conservation    
   
Template Sequence  KRVWED
Template Known Secondary structure 
Template Predicted Secondary structure 
Template SS confidence 





   187..190..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions