Job Description P37666 Confidence 100.00% Date Thu Jan 5 11:56:40 GMT 2012 Rank 40 Aligned Residues 294 % Identity 17% Template c2eezG_ PDB info PDB header:oxidoreductase Chain: G: PDB Molecule:alanine dehydrogenase; PDBTitle: crystal structure of alanine dehydrogenase from themus thermophilus Resolution 2.71 Å

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		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.					.	.	.	.	.	.	.	40	.										.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.
Predicted Secondary structure																									.	.	.	.										.	.	.	.	.	.	.	.	.
Query SS confidence																									.	.	.	.										.	.	.	.	.	.	.	.	.
Query Sequence		A	L	P	D	D	L	L	Q	R	L	Q	E	H	F	T	V	H	Q	V	A	N	L	S	.	.	.	.	P	Q	T	V	E	Q	N	A	A	.	.	.	.	.	.	.	.	.	I	F	A	E	A	E	G	L	L	G	S	N	E	N	V	N	A	A	L	L	E	K	M	P	K	L	R	A	T	S	T	I	S	V	G
Query Conservation																									.	.	.	.										.	.	.	.	.	.	.	.	.
Alig confidence																									.	.	.	.										.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		A	L	T	P	G	G	V	E	S	L	V	R	R	G	H	T	V	L	V	E	R	G	A	G	E	G	S	G	L	S	D	A	E	Y	A	R	A	G	A	E	L	V	G	R	E	E	A	W	G	A	E	M	V	V	K	V	K	E	P	L	P	E	E	Y	G	F	L	R	E	G	L	I	L	F	T	Y	L	H	L	A
Template Known Secondary structure		S												T	T							T	T	T	T	G	G	G	T									T	T										T	T	S	S					S	S				G	G	G	G	G	G			T	T									G	G
Template Predicted Secondary structure
Template SS confidence
		17	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.
		77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.		.	.	.	.	.	.	.	.	150	.	.	.	.	.
Predicted Secondary structure																																																																			.
Query SS confidence																																																																			.
Query Sequence		Y	D	N	F	D	V	D	A	L	T	A	R	K	I	L	L	M	H	T	P	T	V	L	T	E	T	V	A	D	T	L	M	A	L	V	L	S	T	A	R	R	V	V	E	V	A	E	R	V	K	A	G	E	W	T	A	S	I	G	P	D	W	Y	G	T	.	D	V	H	H	K	T	L	G	I	V	G	M	G	R
Query Conservation																																																																			.
Alig confidence																																																																			.
Template Conservation
Template Sequence		A	D	R	G	L	T	E	A	M	L	R	S	G	V	T	G	I	A	Y	E	T	V	Q	L	P	D	G	T	L	P	L	L	V	P	M	S	E	V	A	G	R	M	A	P	Q	V	G	A	Q	F	L	E	K	P	K	G	G	R	G	V	L	L	G	G	V	P	G	V	A	P	A	S	V	V	I	L	G	G	G	T
Template Known Secondary structure		G												T						G	G	G				T	T	S			T	T	T																			T	S	G	G	G	T	S					T	T		B	T	T	B											S
Template Predicted Secondary structure
Template SS confidence
		97	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.
		156	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.										.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.
Predicted Secondary structure																												.	.	.	.	.	.	.	.	.
Query SS confidence																												.	.	.	.	.	.	.	.	.
Query Sequence		I	G	M	A	L	A	Q	R	A	H	F	G	F	N	M	P	I	L	Y	N	A	R	R	H	H	K	.	.	.	.	.	.	.	.	.	E	A	E	E	R	F	N	A	R	Y	C	D	L	D	T	L	L	Q	E	S	D	F	V	C	L	I	L	P	L	T	D	E	T	H	H	L	F	G	A	E	Q	F	A	K	M
Query Conservation																												.	.	.	.	.	.	.	.	.
Alig confidence												.																.	.	.	.	.	.	.	.	.																													.	.	.	.	.	.
Template Conservation												.																																																					.	.	.	.	.	.
Template Sequence		V	G	T	N	A	A	K	I	A	L	.	G	M	G	A	Q	V	T	I	L	D	V	N	H	K	R	L	Q	Y	L	D	D	V	F	G	G	R	V	I	T	L	T	A	T	E	A	N	I	K	K	S	V	Q	H	A	D	L	L	I	G	A	V	L	.	.	.	.	.	.	K	L	V	T	R	D	M	L	S	L	M
Template Known Secondary structure												.		T	T								S												T	T	T		S																T		S								.	.	.	.	.	.			S						T	T	S
Template Predicted Secondary structure												.																																																					.	.	.	.	.	.
Template SS confidence
		177	.	.	180	.	.	.	.	.	.		.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.							.	240	.	.	.	.	.	.	.	.	.
		227	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.								270	.	.	.	.	.	.	.	.	.	280	.				.	.	.	.	.	.	.	.	290	.	.	.	.	.	.
Predicted Secondary structure																																													.	.	.	.	.	.	.													.	.	.
Query SS confidence																																													.	.	.	.	.	.	.													.	.	.
Query Sequence		K	S	S	A	I	F	I	N	A	G	R	G	P	V	V	D	E	N	A	L	I	A	A	L	Q	K	G	E	I	H	A	A	G	L	D	V	F	E	Q	E	P	L	S	.	.	.	.	.	.	.	V	D	S	P	L	L	S	M	A	N	V	V	.	.	.	A	V	P	H	I	G	S	A	T	H	E	T	R	Y	G
Query Conservation																																													.	.	.	.	.	.	.													.	.	.
Alig confidence																										.																			.	.	.	.	.	.	.													.	.	.
Template Conservation																										.
Template Sequence		K	E	G	A	V	I	V	D	V	A	Y	V	V	D	G	V	V	H	Y	G	V	A	N	M	.	P	G	A	V	P	R	T	S	T	F	A	L	T	N	Q	T	L	P	Y	V	L	K	L	A	E	K	G	L	D	A	L	L	E	D	A	A	L	L	K	G	L	N	T	H	K	G	R	L	T	H	P	G	V	A	E
Template Known Secondary structure			T	T											T	T							S		G	.	G	G	G	S																							T	T					T						T	T					T	T
Template Predicted Secondary structure																										.
Template SS confidence
		257	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280		.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.
		297	.	.	300	.	.	.	.	.	.	.	.	.	310	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	A	A	C	A	V	D	N	L	I	D	A	L	Q	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	F	G	L	P	Y	T	P	P	E	E	A	L	R	G
Template Known Secondary structure				T			B								T
Template Predicted Secondary structure
Template SS confidence
		355	.	.	.	.	360	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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