|   |
147 | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | |
|
|
|
|
|
|
|
190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |
|
|
| . | . | . | . | . | . | . | . |  |  |
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
T | L | G | I | V | G | M | G | R | I | G | M | A | L | A | Q | R | A | H | F | G | F | N | M | P | I | L | Y | N | A | R | R | H | H | K | E | A | E | E | R | F | N | A | . |
. |
. |
. |
. |
. |
. |
. |
R | Y | C | D | L | D | T | L | L | Q | E | S | D | F | V | C | L | I | L | P | L | T | D | E | T | H | H | L | F |
Query Conservation |   |
|
|
|
|
|
|   |
|   |
|
|   |   |
|
|   |   |
|   |   |
|
|
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   | . | . | . | . | . | . | . | . |   |   |   |   |
|   |
|
|
|   |   |
|
|
|
|   |   |   |
|
|
|
|   |   |
|   |   |
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|   |
|
|
|
|
|   |
|
|   |   |
|
|   |   |   |
| . |   | . |
|   |   |
|   |
|   |
|   |   |   |   |   |
|   |   |   |   |   |   |
|   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |
|
|
|
|
|
|
|
|   |
|
|   |   |   |
|   |   |   |
Template Sequence |   |
K | V | F | V | I | G | A | G | L | X | G | R | G | I | A | I | A | I | A | . |
S | . |
K | H | E | V | V | L | Q | D | V | S | E | K | A | L | E | A | A | R | E | Q | I | P | E | E | L | L | S | K | I | E | F | T | T | T | L | E | K | V | K | D | C | D | I | V | X | E | A | V | F | E | D | L | N | T | K | V | E | V |
Template Known Secondary structure |   |
 |  |  |  |  |
|
| S |  |  |  |  |  |  |  |  |  |  |  | . | T | . | T | S |  |  |  |  |  |
| S |
|  |  |  |  |  |  |  |  |  |  | S |
| G | G | G | G | G | G |  |  |  |  | S | S |
| T | T | G | G | G |
| S |  |  |  |  |
|
|
| S |
|  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  | . |
| . |
|
|
|  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
2 | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | |
. | |
. | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . |
  |
  |   |
219 | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |
|
|
|  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
G | A | E | Q | F | A | K | M | K | S | S | A | I | F | I | N | A | G | R | G | P | V | V | D | E | N | A | L | I | A | A | L | Q | K | G | E | I | H | A | A | G | L | D | V | F | E | Q | E | P | L | S | V | D | S | P | L | L | S | M | A | N | V | V | A | V | P | H | I | G | S | A | T | H | E | T | R | Y | G | M | A |
Query Conservation |   |
  |   |   |   |
|   |   |
|
|   |
|
|   |
|
|
|   |
|
|
|   |
|
|
|
|   |
|
|   |   |
|
|   |   |
|   |
|   |
|
|
|
|
|
|   |   |   |
|
|
|   |   |   |   |
|
|   |   |   |   |
|
|
|
|
|
|
|   |
|   |   |
|   |   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |
| . |
|   |   |   |   |
|
|
|
|
|
|
|
|   | . | . | . |
|   |
|   |   |
|
|   |   |   | . |   |   |
|   |
|   |   |
|   |
|
|   |   |
| . | . | . |   |   |   |   |   |
|
|
| . | . | . |
|
|   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |
Template Sequence |   |
L | R | E | V | . |
E | R | L | T | N | A | P | L | C | S | N | T | S | V | . |
. |
. |
I | S | V | D | D | I | A | E | R | L | . |
D | S | P | S | R | F | L | G | V | H | W | X | N | P | . |
. |
. |
P | H | V | X | P | L | V | E | . |
. |
. |
I | V | I | S | R | F | T | D | S | K | T | V | A | F | V | E | G | F | L |
Template Known Secondary structure |   |
 |  |  |  | . |  | T | T |
|
| S |
|  |  |  |
|
| S | S | . | . | . | S |
|  |  |  |  |  | T | T | S | . | S |
| G | G | G |  |  |  |  |  |  |
| S | S | . | . | . | T | T | T |
|
|  |  |  | . | . | . |  |  |  |
| T | T |
|
|  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  | . |  |  |  |
|
|
|  |  |  |
|
|
|
|
| . | . | . |
|
|  |  |  |  |  |  |  |
| . |
|
|
|
|
|  |  |  |  |  |
|
|
|
| . | . | . |
|
|
|
|
|  |  |  | . | . | . |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
80 | . | . | . | |
. | . | . | . | . | . | 90 | . | . | . | . | . | . | . | |
|
|
. | . | 100 | . | . | . | . | . | . | . | |
. | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | |
|
|
. | . | . | . | . | . | . | . | |
|
|
130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . |
  |
  |   |
299 | 300 | . |
Predicted Secondary structure |   |
 |  |  |
Query SS confidence |   |
|
|
|
Query Sequence |   |
A | C | A |
Query Conservation |   |
  |   |   |
Alig confidence |   |
|
|
|
Template Conservation |   |
  |   |   |
Template Sequence |   |
R | E | L |
Template Known Secondary structure |   |
 |  | T |
Template Predicted Secondary structure |   |
 |  |
|
Template SS confidence |   |
|
|
|
  |   |
149 | 150 | . |
  |