Job Description P37666 Confidence 96.72% Date Thu Jan 5 11:56:40 GMT 2012 Rank 308 Aligned Residues 112 % Identity 17% Template c1vi2B_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:shikimate 5-dehydrogenase 2; PDBTitle: crystal structure of shikimate-5-dehydrogenase with nad Resolution 2.10 Å

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		140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170		.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.																		190	.	.	.	.	.	.	.	.	.	200	.
Predicted Secondary structure																																	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		G	T	D	V	H	H	K	T	L	G	I	V	G	M	G	R	I	G	M	A	L	A	Q	R	A	H	F	G	F	N	M	.	P	I	L	Y	N	A	R	R	H	H	K	E	A	E	E	R	F	N	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	Y	C	D	L	D	T	L	L	Q	E	S
Query Conservation																																	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																												.					.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																												.
Template Sequence		G	F	D	I	K	G	K	T	X	V	L	L	G	A	G	G	A	S	T	A	I	G	A	Q	G	A	.	I	E	G	L	K	E	I	K	L	F	N	R	R	D	E	F	F	D	K	A	L	A	F	A	Q	R	V	N	E	N	T	D	C	V	V	T	V	T	D	L	A	D	Q	Q	A	F	A	E	A	L	A	S	A
Template Known Secondary structure		T				T	T									S												.		T	T										S	S																	S	S								T	T											S
Template Predicted Secondary structure																												.
Template SS confidence
		119	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.		.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.
		202	.	.	.	.	.	.	.	210	.	.	.		.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.
Predicted Secondary structure														.
Query SS confidence														.
Query Sequence		D	F	V	C	L	I	L	P	L	T	D	E	.	T	H	H	L	F	G	A	E	Q	F	A	K	M	K	S	S	A	I	F	I	N	A	G	R	G	P	V	V	D	E	N	A	L	I	A	A	L	Q	K	G
Query Conservation														.
Alig confidence														.																											.
Template Conservation																																									.
Template Sequence		D	I	L	T	N	G	T	K	V	G	X	K	P	L	E	N	E	S	L	V	N	D	I	S	L	L	H	P	G	L	L	V	T	E	C	V	Y	N	P	.	H	X	T	K	L	L	Q	Q	A	Q	Q	A	G
Template Known Secondary structure		S						S	S	T	T	S	T	T		T	T			S		S		G	G	G			T	T									S	S	.	S	S											T
Template Predicted Secondary structure																																									.
Template SS confidence
		198	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.		.	.	.	240	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions