Job Description P37666 Confidence 100.00% Date Thu Jan 5 11:56:40 GMT 2012 Rank 25 Aligned Residues 296 % Identity 21% Template c1qp8A_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:formate dehydrogenase; PDBTitle: crystal structure of a putative formate dehydrogenase from2 pyrobaculum aerophilum Resolution 2.80 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	V	I	L	Y	K	A	L	P	D	D	L	L	Q	R	L	Q	E	H	F	T	V	H	Q	V	A	N	L	S	P	Q	T	V	E	Q	N	A	A	I	F	A	E	A	E	G	L	L	G	S	N	E	N	V	N	A	A	L	L	E	K	M	P	K	L	R	A	T	S	T	I	S	V	G	Y	D	N	F	D	V	D
Query Conservation
Alig confidence																													.	.	.	.	.	.	.	.	.	.	.	.											.	.
Template Conservation																													.	.	.	.	.	.	.	.	.	.	.	.											.	.
Template Sequence		E	L	Y	V	N	F	E	L	P	P	E	A	E	E	E	L	R	K	Y	F	K	I	V	R	G	G	D	.	.	.	.	.	.	.	.	.	.	.	.	L	G	N	V	E	A	A	L	V	S	.	.	R	I	T	A	E	E	L	A	K	X	P	R	L	K	F	I	Q	V	V	T	A	G	L	D	H	L	P	W	E
Template Known Secondary structure							S												T	T						S	S		.	.	.	.	.	.	.	.	.	.	.	.		T	T	B					B	S	.	.											T	T						B	S	S	S			T	T	S			T
Template Predicted Secondary structure																													.	.	.	.	.	.	.	.	.	.	.	.											.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.													.	30	.	.	.	.	.	.	.	.			.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	L	T	A	R	K	I	L	L	M	H	T	P	T	V	L	T	E	T	V	A	D	T	L	M	A	L	V	L	S	T	A	R	R	V	V	E	V	A	E	R	V	K	A	G	E	W	T	A	S	I	G	P	D	W	Y	G	T	D	V	H	H	K	T	L	G	I	V	G	M	G	R	I	G	M	A	L	A	Q	R
Query Conservation
Alig confidence				.																																																			.	.	.	.
Template Conservation				.																																																			.	.	.	.
Template Sequence		S	I	.	P	P	H	V	T	V	A	G	N	A	G	S	N	A	D	A	V	A	E	F	A	L	A	L	L	L	A	P	Y	K	R	I	I	Q	Y	G	E	K	X	K	R	G	D	Y	G	R	D	V	E	I	.	.	.	.	P	L	I	Q	G	E	K	V	A	V	L	G	L	G	E	I	G	T	R	V	G	K	I
Template Known Secondary structure		T	S	.		T	T	S							S	S	S																	T	T										T	T						S			.	.	.	.				T	T							S		S	T
Template Predicted Secondary structure				.																																																			.	.	.	.
Template SS confidence
		68	.		70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.					120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.
		164	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	H	F	G	F	N	M	P	I	L	Y	N	A	R	R	H	H	K	E	A	E	E	R	F	N	A	R	Y	C	D	L	D	T	L	L	Q	E	S	D	F	V	C	L	I	L	P	L	T	D	E	T	H	H	L	F	G	A	E	Q	F	A	K	M	K	S	S	A	I	F	I	N	A	G	R	G	P	V	V	D	E
Query Conservation
Alig confidence				.																	.	.	.	.
Template Conservation				.																	.	.	.	.
Template Sequence		L	A	.	A	L	G	A	Q	V	R	G	F	S	R	T	P	K	E	G	.	.	.	.	P	W	R	F	T	N	S	L	E	E	A	L	R	E	A	R	A	A	V	C	A	L	P	L	N	K	H	T	R	G	L	V	K	Y	Q	H	L	A	L	X	A	E	D	A	V	F	V	N	V	G	R	A	E	V	L	D	R
Template Known Secondary structure				.		T	T								S	S				S	.	.	.	.	S	S			B	S		S					T	T		S									S	T	T	T	T	T		B						T	T	S		T	T							S		G	G	G	B
Template Predicted Secondary structure				.																	.	.	.	.
Template SS confidence
		143	.		.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160					.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.
		244	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.		.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.			.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320
Predicted Secondary structure																									.																							.	.
Query SS confidence																									.																							.	.
Query Sequence		N	A	L	I	A	A	L	Q	K	G	E	I	H	A	A	G	L	D	V	F	E	Q	E	.	P	L	S	V	D	S	P	L	L	S	M	A	N	V	V	A	V	P	H	I	G	S	.	.	A	T	H	E	T	R	Y	G	M	A	A	C	A	V	D	N	L	I	D	A	L	Q	G	K	V	E	K	N	C	V	N	P
Query Conservation																									.																							.	.
Alig confidence																									.																							.	.
Template Conservation
Template Sequence		D	G	V	L	R	I	L	K	E	R	P	Q	F	I	F	A	S	D	V	W	W	G	R	N	D	F	A	K	D	A	E	F	F	S	L	P	N	V	V	A	T	P	W	V	A	G	G	Y	G	N	E	R	V	W	R	Q	X	V	X	E	A	V	R	N	L	I	T	Y	A	T	G	G	R	P	R	N	I	A	K	R
Template Known Secondary structure												T	T						S			T	T	T	T			G	G	G					T	S	T	T						S		S	S	S	S	S																					T	T	S			S		B			G
Template Predicted Secondary structure
Template SS confidence
		218	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.
		321	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	V	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	D	Y
Template Known Secondary structure		G	G	T
Template Predicted Secondary structure
Template SS confidence
		298	.	300

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions