Return to main results Retrieve Phyre Job Id

Job DescriptionP37666
Confidence96.36%DateThu Jan 5 11:56:40 GMT 2012
Rank345Aligned Residues112
% Identity18%Templatec1ojuA_
PDB info PDB header:oxidoreductaseChain: A: PDB Molecule:malate dehydrogenase; PDBTitle: 2.8 a resolution structure of malate dehydrogenase from2 archaeoglobus fulgidus in complex with etheno-nad.
Resolution2.79 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   146...150.........160.........170 .........180....... ..190.........200.........210
Predicted Secondary structure 







..







.............










Query SS confidence 
























. .
















. . . . . . . . . . . . .






















Query Sequence  KTLGIVGMGRIGMALAQRAHFGFNM. . PILYNARRHHKEAEERF. . . . . . . . . . . . . NARYCDLDTLLQESDFVCLILPL
Query Conservation 






 
 

  

  
  


 .. 
               .............      
 


  



   


Alig confidence 



















.



..
















.............





















.
Template Conservation 


 




 

   
  
 .      

 
 

      
 
 

            
    
   
  








.
Template Sequence  MKLGFVGAGRVGSTSAFTCL. LNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGGADYSLLKGSEIIVVTAG.
Template Known Secondary structure 


S.S

S
SSTTT


S
GGGGTT
S


.
Template Predicted Secondary structure 




.






















.
Template SS confidence 















































































   22.......30.........40. ........50.........60.........70.........80.........90.........
 
   211........220..... ....230.........240......... 250.........
Predicted Secondary structure 






..............












..


Query SS confidence 














. . . . . . . . . . . . . .























. .









Query Sequence  TDETHHLFGAEQFAK. . . . . . . . . . . . . . MKSSAIFINAGRGPVVDENALIAA. . LQKGEIHAAG
Query Conservation 
  
  

    
  ..............

 

 


 


 



 

  
..
  
 
 


Alig confidence 














..............























..









Template Conservation          
  
   
  
   
   
    
 
 








  
      

    



 
Template Sequence  LARKPGMTRLDLAHKNAGIIKDIAKKIVENAPESKILVVTNPMDVMTYIMWKESGKPRNEVFGMG
Template Known Secondary structure 



SS

TTSTT

SSSS


TTS
S
Template Predicted Secondary structure 

















Template SS confidence 
































































   100.........110.........120.........130.........140.........150.........160....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions