Return to main results Retrieve Phyre Job Id

Job DescriptionP37666
Confidence96.24%DateThu Jan 5 11:56:40 GMT 2012
Rank362Aligned Residues105
% Identity11%Templatec1js1Z_
PDB info PDB header:transferaseChain: Z: PDB Molecule:transcarbamylase; PDBTitle: crystal structure of a new transcarbamylase from the2 anaerobic bacterium bacteroides fragilis at 2.0 a3 resolution
Resolution2.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   140.........150.. .......160.........170......... 180.........190.........200.........210..
Predicted Secondary structure 




.....










..
















Query SS confidence 












. . . . .


























. .
































Query Sequence  GTDVHHKTLGIVG. . . . . MGRIGMALAQRAHFGFNMPILYNARRH. . HKEAEERFNARYCDLDTLLQESDFVCLILPLTD
Query Conservation     
 







..... 
 

  

  
  


  
       ..              
 


  



   



 
Alig confidence 












.....












.












..
































Template Conservation 
       
   

       
  
      .  
  
    
                 
  

   





  
   
Template Sequence  KTARPKVVMTWAPHPRPLPQAVPNSFAEWMN. ATDYEFVITHPEGYELDPKFVGNARVEYDQMKAFEGADFIYAKNWAAY
Template Known Secondary structure  SSSS




SS


S.TSSS

TT



TT

S
TT
S





Template Predicted Secondary structure 













.




















Template SS confidence 















































































   163......170.........180.........190... ......200.........210.........220.........230.........240.
 
   213... ...220.........230...... ...240......
Predicted Secondary structure 

...........









...





Query SS confidence 



. . . . . . . . . . .



















. . .









Query Sequence  ETHH. . . . . . . . . . . LFGAEQFAKMKSSAIFINAG. . . RGPVVDENAL
Query Conservation   
  ...........

    
  

 

 


 
...

 



 

Alig confidence 



...........







.










...









Template Conservation                
 
   

 .     



 

  

 

   
 
Template Sequence  TGDNYGQILSTDRNWTVGDRQMA. VTNNAYFMHCLPVRRNMIVTDDVI
Template Known Secondary structure  SGGGTT





TTSSB
T.TSSS


S


BTTTB
Template Predicted Secondary structure 







.















Template SS confidence 















































   242.......250.........260.... .....270.........280........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions