Job Description P37666 Confidence 100.00% Date Thu Jan 5 11:56:40 GMT 2012 Rank 17 Aligned Residues 311 % Identity 24% Template c1j4aA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:d-lactate dehydrogenase; PDBTitle: insights into domain closure, substrate specificity and2 catalysis of d-lactate dehydrogenase from lactobacillus3 bulgaricus Resolution 1.90 Å

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		4	.	.	.	.	.			10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.		.	.	.	.	.	.	.	.	60	.	.	.	.	.	.			.	.	.	70	.	.	.	.	.	.	.	.
Predicted Secondary structure								.	.																																											.																.	.
Query SS confidence								.	.																																											.																.	.
Query Sequence		S	V	I	L	Y	K	.	.	A	L	P	D	D	L	L	Q	R	L	Q	E	H	F	T	V	H	Q	V	A	N	L	S	P	Q	T	V	E	Q	N	A	A	I	F	A	E	A	E	G	L	L	G	.	S	N	E	N	V	N	A	A	L	L	E	K	M	P	K	.	.	L	R	A	T	S	T	I	S	V	G	Y	D
Query Conservation								.	.																																											.																.	.
Alig confidence								.	.																																											.																.	.
Template Conservation
Template Sequence		K	I	F	A	Y	A	I	R	E	D	E	K	P	F	L	K	E	W	E	D	A	H	K	D	V	E	V	E	Y	T	D	K	L	L	T	P	E	T	V	A	L	A	K	G	A	D	G	V	V	V	Y	Q	Q	L	D	Y	I	A	E	T	L	Q	A	L	A	D	N	G	I	T	K	M	S	L	R	N	V	G	V	D
Template Known Secondary structure							S			G	G	G										T		T	T	S						S	S				T	T	T	G	G	G	G	T	T		S							S	S		B											T	T							S	S	S			T
Template Predicted Secondary structure
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	F	D	V	D	A	L	T	A	R	K	I	L	L	M	H	T	P	T	V	L	T	E	T	V	A	D	T	L	M	A	L	V	L	S	T	A	R	R	V	V	E	V	A	E	R	V	K	A	G	E	W	T	A	S	I	G	P	D	W	Y	G	T	D	V	H	H	K	T	L	G	I	V	G	M	G	R	I	G	M
Query Conservation
Alig confidence																																																													.	.	.
Template Conservation																																																													.	.	.
Template Sequence		N	I	D	M	A	K	A	K	E	L	G	F	Q	I	T	N	V	P	V	Y	S	P	N	A	I	A	E	H	A	A	I	Q	A	A	R	I	L	R	Q	D	K	A	M	D	E	K	V	A	R	H	D	L	R	W	A	P	T	I	G	.	.	.	R	E	V	R	D	Q	V	V	G	V	V	G	T	G	H	I	G	Q
Template Known Secondary structure		T	B								T	T									S																			T										T	T					T	T				.	.	.			G	G	G	S								S
Template Predicted Secondary structure																																																													.	.	.
Template SS confidence
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.				.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	L	A	Q	R	A	H	F	G	F	N	M	P	I	L	Y	N	A	R	R	H	H	K	E	A	E	E	R	F	N	A	R	Y	C	D	L	D	T	L	L	Q	E	S	D	F	V	C	L	I	L	P	L	T	D	E	T	H	H	L	F	G	A	E	Q	F	A	K	M	K	S	S	A	I	F	I	N	A	G	R	G
Query Conservation
Alig confidence									.																	.
Template Conservation									.																	.
Template Sequence		V	F	M	Q	I	M	E	.	G	F	G	A	K	V	I	T	Y	D	I	F	R	N	P	E	.	L	E	K	K	G	Y	Y	V	D	S	L	D	D	L	Y	K	Q	A	D	V	I	S	L	H	V	P	D	V	P	A	N	V	H	M	I	N	D	E	S	I	A	K	M	K	Q	D	V	V	I	V	N	V	S	R	G
Template Known Secondary structure									.		T	T								S	S					.				T	T		B		S										S						S				G	G	G	T	T		B	S							S		T	T							S		G
Template Predicted Secondary structure									.																	.
Template SS confidence
		160	.	.	.	.	.	.		.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.		.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.
		239	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.														.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.
Predicted Secondary structure																														.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																														.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		P	V	V	D	E	N	A	L	I	A	A	L	Q	K	G	E	I	H	A	A	G	L	D	V	F	E	Q	E	.	.	.	.	.	.	.	.	.	.	.	.	.	P	L	S	V	D	S	P	L	L	S	M	A	N	V	V	A	V	P	H	I	G	S	A	T	H	E	T	R	Y	G	M	A	A	C	A	V	D	N	L
Query Conservation																														.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																														.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		P	L	V	D	T	D	A	V	I	R	G	L	D	S	G	K	I	F	G	Y	A	M	D	V	Y	E	G	E	V	G	I	F	N	E	D	W	E	G	K	E	F	P	D	A	R	L	A	D	L	I	A	R	P	N	V	L	V	T	P	K	T	A	F	Y	T	T	H	A	V	R	N	M	V	V	K	A	F	D	N	N
Template Known Secondary structure		G	G	B												T	S							S			T	T		T	T	T	T	T	S			T	T	S			S											T	T					S	S		T	T		S
Template Predicted Secondary structure
Template SS confidence
		238	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.
		306	.	.	.	310	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	D	A	L	Q	G	K	V	E	K	N	C	V	N
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	E	L	V	E	G	K	E	A	E	T	P	V	K
Template Known Secondary structure						T	T				S	S	B
Template Predicted Secondary structure
Template SS confidence
		318	.	320	.	.	.	.	.	.	.	.	.	330	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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