Job Description P37666 Confidence 99.97% Date Thu Jan 5 11:56:40 GMT 2012 Rank 44 Aligned Residues 305 % Identity 15% Template c1d4fD_ PDB info PDB header:hydrolase Chain: D: PDB Molecule:s-adenosylhomocysteine hydrolase; PDBTitle: crystal structure of recombinant rat-liver d244e mutant s-2 adenosylhomocysteine hydrolase Resolution 2.80 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		4	.	.	.	.	.	10	.	.	.	.				.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.		.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.										.	.	70
Predicted Secondary structure													.	.	.																					.																																		.	.	.	.	.	.	.	.	.
Query SS confidence													.	.	.																					.																																		.	.	.	.	.	.	.	.	.
Query Sequence		S	V	I	L	Y	K	A	L	P	D	D	.	.	.	L	L	Q	R	L	Q	E	H	F	T	V	H	Q	V	A	N	L	S	P	Q	.	T	V	E	Q	N	A	A	I	F	A	E	A	E	G	L	L	G	S	N	E	N	V	N	A	A	L	L	E	K	M	P	K	L	.	.	.	.	.	.	.	.	.	R	A	T
Query Conservation													.	.	.																					.																																		.	.	.	.	.	.	.	.	.
Alig confidence													.	.	.																					.																																		.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		R	I	A	G	C	L	H	M	T	V	E	T	A	V	L	I	E	T	L	V	A	L	G	A	E	V	R	W	S	S	C	N	I	F	S	T	Q	D	H	A	A	A	A	I	A	K	A	G	I	P	V	F	A	W	K	G	E	T	D	E	E	Y	L	W	C	I	E	Q	T	L	H	F	K	D	G	P	L	N	M	I
Template Known Secondary structure										S													T	T								S	S	T	T	T												T	T							S	S												T	T	S			T	T
Template Predicted Secondary structure
Template SS confidence
		48	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.
		71	.	.	.	.	.	.	.	.	80	.	.	.	.						.	.	.	.	.	90	.	.	.	.	.	.	.	.	.		100	.	.	.	.	.	.							.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.
Predicted Secondary structure																.	.	.	.	.																.								.	.	.	.	.	.
Query SS confidence																.	.	.	.	.																.								.	.	.	.	.	.
Query Sequence		S	T	I	S	V	G	Y	D	N	F	D	V	D	A	.	.	.	.	.	L	T	A	R	K	I	L	L	M	H	T	P	T	V	L	.	T	E	T	V	A	D	T	.	.	.	.	.	.	L	M	A	L	V	L	S	T	A	R	R	V	V	E	V	A	E	R	V	K	A	G	E	W	T	A	S	I	G	P	D	W
Query Conservation																.	.	.	.	.																.								.	.	.	.	.	.
Alig confidence																.	.	.	.	.																.								.	.	.	.	.	.																														.	.
Template Conservation																																																																															.	.
Template Sequence		L	D	D	G	G	D	L	T	N	L	I	H	T	K	H	P	Q	L	L	S	G	I	R	G	I	S	E	E	T	T	T	G	V	H	N	L	Y	K	M	M	A	N	G	I	L	K	V	P	A	I	N	V	N	D	S	V	T	K	S	K	F	D	N	L	Y	G	C	R	E	S	L	I	D	G	I	K	R	.	.	A
Template Known Secondary structure				S	S	S									T		G	G	G	G	T	T								S													T	T				S					S	T	T						T	T	T	T															.	.
Template Predicted Secondary structure																																																																															.	.
Template SS confidence
		128	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.			.
		139	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.		.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.
Predicted Secondary structure																																										.
Query SS confidence																																										.
Query Sequence		Y	G	T	D	V	H	H	K	T	L	G	I	V	G	M	G	R	I	G	M	A	L	A	Q	R	A	H	F	G	F	N	M	P	I	L	Y	N	A	R	R	.	H	H	K	E	A	E	E	R	F	N	A	R	Y	C	D	L	D	T	L	L	Q	E	S	D	F	V	C	L	I	L	P	L	T	D	E	T	H	H	L
Query Conservation																																										.
Alig confidence																													.													.																																.	.	.	.
Template Conservation																													.																																													.	.	.	.
Template Sequence		T	D	V	M	I	A	G	K	V	A	V	V	A	G	Y	G	D	V	G	K	G	C	A	Q	A	L	R	.	G	F	G	A	R	V	I	I	T	E	I	E	P	I	N	A	L	Q	A	A	M	E	G	Y	E	V	T	T	M	D	E	A	C	K	E	G	N	I	F	V	T	T	T	G	.	.	.	.	C	V	D	I
Template Known Secondary structure							T	T	S								S												.			T								S											T	T										T	T	T		S								.	.	.	.	S	S		S
Template Predicted Secondary structure																													.																																													.	.	.	.
Template SS confidence
		206	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.		.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.					.	.	.	280
		218	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240		.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.
Predicted Secondary structure																									.
Query SS confidence																									.
Query Sequence		F	G	A	E	Q	F	A	K	M	K	S	S	A	I	F	I	N	A	G	R	G	P	V	.	V	D	E	N	A	L	I	A	A	L	Q	K	G	E	I	H	A	A	G	L	D	V	F	E	Q	E	P	L	S	V	D	S	P	L	L	S	M	A	N	V	V	A	V	P	H	I	G	S	A	T	H	E	T	R	Y	G
Query Conservation																									.
Alig confidence																									.																												.														.	.	.
Template Conservation																																																					.														.	.	.
Template Sequence		I	L	G	R	H	F	E	Q	M	K	D	D	A	I	V	C	N	I	G	H	F	D	V	E	I	D	V	K	W	L	N	E	N	A	V	E	K	V	N	I	K	P	Q	V	D	R	Y	L	L	K	N	.	G	H	R	I	I	L	L	A	E	G	R	L	V	.	.	.	N	L	G	C	A	M	G	H	P	S	F	V
Template Known Secondary structure		B						T	T	S		T	T							S	S	S	S		S	B							T	T									T	T							T	T	.	S							G	G	G	S	B	S	.	.	.					S			S
Template Predicted Secondary structure																																																					.														.	.	.
Template SS confidence
		281	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.		.	.	.	.	.	.	.	.	340	.	.	.	.				.	.	.	.	.	350	.	.	.	.	.	.
		297	.	.	300	.	.	.	.	.			.	.	.	.	310	.	.	.	.	.	.	.	.	.
Predicted Secondary structure											.	.
Query SS confidence											.	.
Query Sequence		M	A	A	C	A	V	D	N	L	.	.	I	D	A	L	Q	G	K	V	E	K	N	C	V	N
Query Conservation											.	.
Alig confidence											.	.
Template Conservation
Template Sequence		M	S	N	S	F	T	N	Q	V	M	A	Q	I	E	L	W	T	H	P	D	K	Y	P	V	G
Template Known Secondary structure																	T	T		G	G	G			S	S
Template Predicted Secondary structure
Template SS confidence
		357	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions