Job Description P77625 Confidence 99.69% Date Thu Jan 5 12:31:15 GMT 2012 Rank 76 Aligned Residues 205 % Identity 16% Template c1zjjA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:hypothetical protein ph1952; PDBTitle: crystal structure of hypothetical protein ph1952 from pyrococcus2 horikoshii ot3 Resolution 1.85 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.			.	.	.	30	.	.	.	.	.												.	.	.	.	40	.	.	.	.	.	.	.															.	.	50	.	.	.	.	.
Predicted Secondary structure																										.	.										.	.	.	.	.	.	.	.	.	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																										.	.										.	.	.	.	.	.	.	.	.	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		C	K	G	F	L	F	D	L	D	G	T	L	V	D	S	L	P	A	V	E	R	A	W	S	.	.	N	W	A	R	R	H	G	L	A	.	.	.	.	.	.	.	.	.	.	.	P	E	E	V	L	A	F	I	H	G	K	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	I	T	S	L	R	H	F
Query Conservation																										.	.										.	.	.	.	.	.	.	.	.	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																										.	.										.	.	.	.	.	.	.	.	.	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		M	V	A	I	I	F	D	M	D	G	V	L	Y	R	G	N	R	A	I	P	G	V	R	E	L	I	E	F	L	K	E	R	G	I	P	F	A	F	L	T	N	N	S	T	K	T	P	E	M	Y	R	E	K	L	L	K	M	G	I	D	V	S	S	S	I	I	I	T	S	G	L	A	T	R	L	Y	M	S	K	H
Template Known Secondary structure										B	T	T	T			T	T				T	T												T								S			S	S											T	T	T					G	G	G
Template Predicted Secondary structure
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
		56	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.																							.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.
Predicted Secondary structure																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		M	A	G	K	S	E	A	D	I	A	A	E	F	T	R	L	E	H	I	E	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	E	T	E	G	I	T	A	L	P	G	A	I	A	L	L	S	H	L	N	K	A	G	I	P	W	A	I	V	T	S	G	S	M	P	V	A
Query Conservation																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	D	P	G	K	I	F	V	I	G	G	E	G	L	V	K	E	M	Q	A	L	G	W	G	I	V	T	L	D	E	A	R	Q	G	S	W	K	E	V	K	H	V	V	V	G	L	D	P	D	L	T	Y	E	K	L	K	Y	A	T	L	A	I	R	N	G	A	T	F	I	G	T	N	P	D	A	T	L	P	G	E
Template Known Secondary structure		S									S												T	S		B								T	T	G	G	G	G										T	T															T	T						S				S					T
Template Predicted Secondary structure
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
		114	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.		.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.
Predicted Secondary structure																																																						.
Query SS confidence																																																						.
Query Sequence		R	A	R	H	K	I	A	G	L	P	A	P	E	V	F	V	T	A	E	R	V	K	R	G	K	P	E	P	D	A	Y	L	L	G	A	Q	L	L	G	L	A	P	Q	E	C	V	V	V	E	D	A	P	.	A	G	V	L	S	G	L	A	A	G	C	H	V	I	A	V	N	A	P	A	D	T	P	R	L	N	E
Query Conservation																																																						.
Alig confidence																																																						.
Template Conservation
Template Sequence		E	G	I	Y	P	G	A	G	S	I	I	A	A	L	K	V	A	T	N	V	E	P	I	I	I	G	K	P	N	E	P	M	Y	E	V	V	R	E	M	F	P	G	E	E	L	W	M	V	G	D	R	L	D	T	D	I	A	F	A	K	K	F	G	M	K	A	I	M	V	L	T	G	V	S	S	L	E	D	I	K
Template Known Secondary structure		T																									S	T	T	S											S	T	T								S		T	T	T								T	T							S	S	S	S							T
Template Predicted Secondary structure
Template SS confidence
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
							193	.	.	.	.	.	.	200	.	.	.		.	.	.	.
Predicted Secondary structure		.	.	.	.	.												.
Query SS confidence		.	.	.	.	.												.
Query Sequence		.	.	.	.	.	V	D	L	V	L	H	S	L	E	Q	I	.	T	V	T	K
Query Conservation		.	.	.	.	.												.
Alig confidence		.	.	.	.	.												.
Template Conservation
Template Sequence		K	S	E	Y	K	P	D	L	V	L	P	S	V	Y	E	L	I	D	Y	L	K
Template Known Secondary structure		T		S	S			S				S	S	G	G	G	G	G	G	G	G
Template Predicted Secondary structure
Template SS confidence
		241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions