Job Description P21866 Confidence 51.69% Date Thu Jan 5 11:38:36 GMT 2012 Rank 223 Aligned Residues 40 % Identity 8% Template d1or7a1 SCOP info DNA/RNA-binding 3-helical bundle Sigma3 and sigma4 domains of RNA polymerase sigma factors Sigma4 domain Resolution 2.00

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	V	L	L	N	N	A	G	K	V	L	T	Q	R	Q	L	L	N	Q	V	W	G	P	N	A	V	E	H	S	H	Y	L	R	I	Y	M	G	H	L	R	Q	K	L	E	Q
Query Conservation
Alig confidence																						.	.	.	.	.
Template Conservation																						.	.	.	.	.
Template Sequence		M	A	I	T	L	R	E	L	D	G	L	S	Y	E	E	I	A	A	I	M	.	.	.	.	.	D	C	P	V	G	T	V	R	S	R	I	F	R	A	R	E	A	I	D	N
Template Known Secondary structure									T	T											T	.	.	.	.	.	T	S
Template Predicted Secondary structure																						.	.	.	.	.
Template SS confidence
		144	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.						.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions