 |
Job Description | P21866 | Confidence | 23.69% | Date | Thu Jan 5 11:38:36 GMT 2012 |
Rank | 352 | Aligned Residues | 92 |
% Identity | 14% | Template | c3msyC_ |
PDB info |
PDB header:isomerase | Chain: C: PDB Molecule:mandelate racemase/muconate lactonizing enzyme; |
PDBTitle: crystal structure of mandelate racemase/muconate lactonizing enzyme2 from a marine actinobacterium
|
Resolution | 2.50 Å |
|
 |
  |   |
8 | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | |
. | . | . | . | . | . | . | . | |
|
30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | |
. | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . |
Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  |  |  |  |  |  | . |  |  |
|
|
|  |  |  | . | . |  |  |
|
|  |  |  |  |  |  |  |  |  |  |
| . |
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
E | D | E | Q | A | I | R | R | F | L | R | T | A | L | . |
E | G | D | G | M | R | V | F | . |
. |
E | A | E | T | L | Q | R | G | L | L | E | A | A | T | R | . |
K | P | D | L | I | I | L | D | L | G | L | P | D | G | D | G | I | E | F | I | R | D | L | R | Q | W | S | A | V | P | V | I | V | L | S | A | R | S | E |
Query Conservation |   |
|
|
|   |   |   |   |   |   |
|   |   |   |
| . |   |   |   |
|   |   |
|   | . | . |   |   |   |   |   |   |
|
|
|   |   |   |   |   |   | . |   |   |
|
|
|
|
|
|   |   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |
|
|   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |
|   |   |   |
|   |   |
|
|   |   |   |
|   |   |   |   |
|   |   |
|
|
|   |   |   |   |   |   |   |
|   |   |   |   |   |   |
|   |   |   |   |
|   |   |
|
|
|
|   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |
|
|
|
|   |
|
|
|   |   |   |
Template Sequence |   |
A | E | D | A | A | R | I | T | A | A | R | E | A | A | G | D | D | F | I | I | C | I | D | A | N | Q | G | Y | K | P | A | V | A | V | D | L | S | R | R | I | A | D | L | N | I | R | W | F | E | E | P | V | E | W | H | N | D | K | R | S | X | R | D | V | R | Y | Q | G | S | V | P | V | C | A | G | Q | T | E | F | S |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |
| S | S | S |  |  |  |  |  |
| T | T |
| B |
|  |  |  |  |  |  |  |  |  |  | T | T | T | S |
|  |  |  |  |  | S |
| B |
| S | T | T |  |  |  |  |  |  |  |  |  |  |  | S | S | S |
|  |  |  |
| T | T |
| S | S |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
193 | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . |
  |
  |   |
84 | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
E | S | D | K | I | A | A | L | D | A | G | A | D | D | Y | L |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |
|
|   |   |
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |
|   |   |   |   |   |   |   |   |   |   |
|   |
|
Template Sequence |   |
A | S | G | C | R | D | L | X | E | T | G | A | I | D | V | C |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  | T |
|
| S |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
273 | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|