Return to main results Retrieve Phyre Job Id

Job DescriptionP21866
Confidence93.56%DateThu Jan 5 11:38:36 GMT 2012
Rank151Aligned Residues95
% Identity16%Templatec3ezxA_
PDB info PDB header:transferaseChain: A: PDB Molecule:monomethylamine corrinoid protein 1; PDBTitle: structure of methanosarcina barkeri monomethylamine2 corrinoid protein
Resolution2.56 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2..... ..10.........20.........30.. .......40.........50. ....... .60.........70
Predicted Secondary structure 
....






...




..





..











Query SS confidence 





. . . .
























. . .


















. .






. .











Query Sequence  TNVLIV. . . . EDEQAIRRFLRTALEGDGMRVFEAE. . . TLQRGLLEAATRKPDLIIL. . DLGLPDG. . DGIEFIRDLRQW
Query Conservation   




....


      
   
   
  
    ...   


        




..
   
  .. 
          
Alig confidence 





....
























...


















..






..











Template Conservation    

     

 
 

  

   
   
  
  

   
             
 
 

 
             
  
   
Template Sequence  GLAITFVAEGDIHDIGHRLVTTMLGANGFQIVDLGVDVLNENVVEEAAKHKGEKVLLVGSALMTTSMLGQKDLMDRLNEE
Template Known Secondary structure 

TT



TS


SS

TTTS

SSTT
Template Predicted Secondary structure 

























Template SS confidence 















































































   94.....100.........110.........120.........130.........140.........150.........160.........170...
 
   71........80.........90........
Predicted Secondary structure  ..












Query SS confidence  . .



























Query Sequence  . . SAVPVIVLSARSEESDKIAALDAGADDY
Query Conservation  ..    

 

              

  
Alig confidence  ..




















..




Template Conservation       
 
 


          
..


  
Template Sequence  KLRDSVKCMFGGAPVSDKWIEEI. . GADAT
Template Known Secondary structure  T
GGGSSSS

..T

B
Template Predicted Secondary structure 










..


Template SS confidence 





























   174.....180.........190...... ...200.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions