Job Description P21866 Confidence 99.87% Date Thu Jan 5 11:38:36 GMT 2012 Rank 17 Aligned Residues 194 % Identity 26% Template c3c3wB_ PDB info PDB header:transcription Chain: B: PDB Molecule:two component transcriptional regulatory protein devr; PDBTitle: crystal structure of the mycobacterium tuberculosis hypoxic response2 regulator dosr Resolution 2.20 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.			.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.		.	.	.	.	.
Predicted Secondary structure																												.	.																																															.
Query SS confidence																												.	.																																															.
Query Sequence		M	T	N	V	L	I	V	E	D	E	Q	A	I	R	R	F	L	R	T	A	L	E	G	D	G	M	.	.	R	V	F	E	A	E	T	L	Q	R	G	L	L	E	A	A	T	R	K	P	D	L	I	I	L	D	L	G	L	P	D	G	D	G	I	E	F	I	R	D	L	R	Q	W	S	A	.	V	P	V	I	V
Query Conservation																												.	.																																															.
Alig confidence																												.	.																																															.
Template Conservation
Template Sequence		M	V	K	V	F	L	V	D	D	H	E	V	V	R	R	G	L	V	D	L	L	G	A	D	P	E	L	D	V	V	G	E	A	G	S	V	A	E	A	M	A	R	V	P	A	A	R	P	D	V	A	V	L	D	V	R	L	P	D	G	N	G	I	E	L	C	R	D	L	L	S	R	M	P	D	L	R	C	L	I
Template Known Secondary structure										S														T		T	T								S	S														S						S			T	T														S	T	T
Template Predicted Secondary structure
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	S	A	R	S	E	E	S	D	K	I	A	A	L	D	A	G	A	D	D	Y	L	S	K	P	F	G	I	G	E	L	Q	A	R	L	R	V	A	L	R	R	H	S	A	T	T	A	P	D	P	L	V	K	F	S	D	V	T	V	D	L	A	A	R	V	I	H	R	G	E	E	E	V	H	L	T	P	I	E	F
Query Conservation
Alig confidence																																																															.	.	.	.	.
Template Conservation																																																															.	.	.	.	.
Template Sequence		L	T	S	Y	T	S	D	E	A	M	L	D	A	I	L	A	G	A	S	G	Y	V	V	K	D	I	K	G	M	E	L	A	R	A	V	K	D	V	G	A	G	R	S	L	L	D	N	R	A	A	A	A	L	M	A	K	L	R	G	A	A	.	.	.	.	.	E	K	Q	D	P	L	S	G	L	T	D	Q	E	R
Template Known Secondary structure		G	G	G	S	S	S											T																									G	G	G	S																	.	.	.	.	.			S		T	T	T	T	S
Template Predicted Secondary structure																																																															.	.	.	.	.
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.						.	.	.	.	.	.	.	.	150	.	.	.	.	.
		158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	L	L	A	V	L	L	N	N	A	G	K	V	L	T	Q	R	Q	L	L	N	Q	V	W	G	P	N	A	V	E	H	S	H	Y	L	R	I	Y	M	G	H	L	R	Q	K	L	E	Q	D	P	A
Query Conservation
Alig confidence												.	.	.	.										.	.	.	.	.
Template Conservation												.	.	.	.										.	.	.	.	.
Template Sequence		T	L	L	G	L	L	S	E	G	L	.	.	.	.	T	N	K	Q	I	A	D	R	M	.	.	.	.	.	F	L	A	E	K	T	V	K	N	Y	V	S	R	L	L	A	K	L	G	M	E	R	R
Template Known Secondary structure								T	T	T		.	.	.	.										.	.	.	.	.	T																	T	T			S	S
Template Predicted Secondary structure												.	.	.	.										.	.	.	.	.
Template SS confidence
		156	.	.	.	160	.	.	.	.	.					.	.	.	.	170	.	.	.	.						.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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