Job Description P21866 Confidence 50.68% Date Thu Jan 5 11:38:36 GMT 2012 Rank 225 Aligned Residues 99 % Identity 14% Template c2vs1A_ PDB info PDB header:transferase Chain: A: PDB Molecule:uncharacterized rna methyltransferase pyrab10780; PDBTitle: the crystal structure of pyrococcus abyssi trna (uracil-54,2 c5)-methyltransferase in complex with s-adenosyl-l-3 homocysteine Resolution 2.1 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60		.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure																																																													.
Query SS confidence																																																													.
Query Sequence		T	N	V	L	I	V	E	D	E	Q	A	I	R	R	F	L	R	T	A	L	E	G	D	G	M	R	V	F	E	A	E	T	L	Q	R	G	L	L	E	A	A	T	R	K	P	D	L	I	I	L	D	L	G	L	P	D	G	D	G	.	I	E	F	I	R	D	L	R	Q	W	S	A	V	P	V	I	V	L	S	A
Query Conservation																																																													.
Alig confidence																																									.	.	.										.	.							.
Template Conservation																																									.	.	.										.	.
Template Sequence		F	N	V	K	G	F	D	S	N	E	F	A	I	E	M	A	R	R	N	V	E	I	N	N	V	D	A	E	F	E	V	A	S	D	R	E	V	S	V	.	.	.	K	G	F	D	T	V	I	V	D	.	.	P	P	R	A	G	L	H	P	R	L	V	K	R	L	N	R	E	K	P	G	V	I	V	Y	V	S	C
Template Known Secondary structure									S															T	T										T	T	T				.	.	.	T	T		S						.	.			T	T		S														S							S
Template Predicted Secondary structure																																									.	.	.										.	.
Template SS confidence
		293	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.				.	.	.	.	.	.	.	.	340			.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	S	E	E	S	D	K	I	A	A	L	D	A	G	A	D	D	Y	L	S	K	P	F	G	I	G	E	L	Q
Query Conservation
Alig confidence														.	.	.	.
Template Conservation														.	.	.	.
Template Sequence		N	P	E	T	F	A	R	D	V	K	M	L	.	.	.	.	D	Y	R	I	D	E	I	V	A	L	D	M	F
Template Known Secondary structure													T	.	.	.	.	T												S
Template Predicted Secondary structure														.	.	.	.
Template SS confidence
		368	.	370	.	.	.	.	.	.	.	.	.					380	.	.	.	.	.	.	.	.	.	390	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions