Return to main results Retrieve Phyre Job Id

Job DescriptionP21866
Confidence99.87%DateThu Jan 5 11:38:36 GMT 2012
Rank20Aligned Residues120
% Identity31%Templatec2jrlA_
PDB info PDB header:transcriptionChain: A: PDB Molecule:transcriptional regulator (ntrc family); PDBTitle: solution structure of the beryllofluoride-activated ntrc4 receiver2 domain dimer
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1........10.........20.........30.........40.........50.........60.........70.. .......
Predicted Secondary structure 

































.


Query SS confidence 







































































.






Query Sequence  MTNVLIVEDEQAIRRFLRTALEGDGMRVFEAETLQRGLLEAATRKPDLIILDLGLPDGDGIEFIRDLRQWSA. VPVIVLS
Query Conservation 
 







      
   
   
  
       


        





   
   
            .  

 

Alig confidence 







































































.






Template Conservation 
  





       
   
   
  
       


  
     
 

 
  

   
      
        

 

Template Sequence  MKRVLVVDDEESITSSLSAILEEEGYHPDTAKTLREAEKKIKELFFPVIVLDVWMPDGDGVNFIDFIKENSPDSVVIVIT
Template Known Secondary structure 

B
S
TT
B

S
TTS

SS

SSS
STTT
SS
Template Predicted Secondary structure 





































Template SS confidence 















































































   1........10.........20.........30.........40.........50.........60.........70.........80
 
   80.........90.........100.........110.........120
Predicted Secondary structure 























Query SS confidence 








































Query Sequence  ARSEESDKIAALDAGADDYLSKPFGIGELQARLRVALRRHS
Query Conservation                

  
  

     
   
        
Alig confidence 








































Template Conservation                

  

 

     
   
   
   
Template Sequence  GHGSVDTAVKAIKKGAYEFLEKPFSVERFLLTIKHAFEEYS
Template Known Secondary structure  SS

TS



Template Predicted Secondary structure 












Template SS confidence 








































   81........90.........100.........110.........120.
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions