Job Description P21866 Confidence 100.00% Date Thu Jan 5 11:38:36 GMT 2012 Rank 5 Aligned Residues 214 % Identity 22% Template c2hqrA_ PDB info PDB header:signaling protein Chain: A: PDB Molecule:putative transcriptional regulator; PDBTitle: structure of a atypical orphan response regulator protein revealed a2 new phosphorylation-independent regulatory mechanism Resolution UNK

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.		.	.	.	.	.	.	.	80	.
Predicted Secondary structure																																																																								.
Query SS confidence																																																																								.
Query Sequence		N	V	L	I	V	E	D	E	Q	A	I	R	R	F	L	R	T	A	L	E	G	D	G	M	R	V	F	E	A	E	T	L	Q	R	G	L	L	E	A	A	T	R	K	P	D	L	I	I	L	D	L	G	L	P	D	G	D	G	I	E	F	I	R	D	L	R	Q	W	S	A	.	V	P	V	I	V	L	S	A	R
Query Conservation																																																																								.
Alig confidence																																																		.	.	.	.																			.
Template Conservation																																																		.	.	.	.
Template Sequence		R	V	L	L	I	E	K	N	S	V	L	G	G	E	I	E	K	G	L	N	V	K	G	F	M	A	D	V	T	E	S	L	E	D	G	E	Y	L	M	D	I	R	N	Y	D	L	V	M	.	.	.	.	V	S	D	K	N	A	L	S	F	V	S	R	I	K	E	K	H	S	S	I	V	V	L	V	S	S	D	N
Template Known Secondary structure								S													G	G	G	T							S	S									T	T	S			S				.	.	.	.				T	T													T	T	S							S	S
Template Predicted Secondary structure																																																		.	.	.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.					50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	E	E	S	D	K	I	A	A	L	D	A	G	A	D	D	Y	L	S	K	P	F	G	I	G	E	L	Q	A	R	L	R	V	A	L	R	R	H	S	A	T	T	A	P	D	P	L	V	K	F	S	D	V	T	V	D	L	A	A	R	V	I	H	R	G	E	E	E	V	H	L	T	P	I	E	F	R	L	L	A
Query Conservation
Alig confidence																																									.	.	.	.
Template Conservation																																									.	.	.	.
Template Sequence		P	T	S	E	E	E	V	H	A	F	E	Q	G	A	D	D	Y	I	A	K	P	Y	R	S	I	K	A	L	V	A	R	I	E	A	R	L	R	F	W	.	.	.	.	G	S	N	V	I	E	I	G	D	L	T	I	S	P	D	E	E	K	I	I	Y	K	G	R	E	V	E	V	K	G	K	P	F	E	V	L	T
Template Known Secondary structure														T		S					T	T		S		T											T	S	S		.	.	.	.				S				T	T					T	T	T	T					T	T							S	T	T	T
Template Predicted Secondary structure																																									.	.	.	.
Template SS confidence
		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.					.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	L	L	N	N	A	G	K	V	L	T	Q	R	Q	L	L	N	Q	V	W	G	P	N	A	V	E	H	S	H	Y	L	R	I	Y	M	G	H	L	R	Q	K	L	E	Q	D	P	A	R	P	R	H	F	I	T	E	T	G	I	G	Y	R	F	M	L
Query Conservation
Alig confidence																																														.
Template Conservation																																														.
Template Sequence		H	L	A	R	H	R	D	Q	I	V	S	K	E	Q	L	L	D	A	I	W	E	E	P	E	M	V	T	P	N	V	I	E	V	A	I	N	Q	I	R	Q	K	M	D	K	.	P	L	G	I	S	T	V	E	T	V	R	R	R	G	Y	R	F	C	Y
Template Known Secondary structure						T		S															S	S		S		G	G	G	T														T	.	T	S	S	S							S	S	S
Template Predicted Secondary structure																																														.
Template SS confidence
		154	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.		.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions