 |
Job Description | P21866 | Confidence | 28.50% | Date | Thu Jan 5 11:38:36 GMT 2012 |
Rank | 326 | Aligned Residues | 85 |
% Identity | 11% | Template | c1yl7F_ |
PDB info |
PDB header:oxidoreductase | Chain: F: PDB Molecule:dihydrodipicolinate reductase; |
PDBTitle: the crystal structure of mycobacterium tuberculosis2 dihydrodipicolinate reductase (rv2773c) in complex with nadh (crystal3 form c)
|
Resolution | 2.34 Å |
|
 |
  |   |
2 | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | |
. | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 |
Predicted Secondary structure |   |
|  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
| . |
|
|  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
T | N | V | L | I | V | E | D | E | Q | A | I | R | R | F | L | R | T | A | L | E | G | D | . |
G | M | R | V | F | E | A | E | T | L | Q | R | G | L | L | E | A | A | T | R | K | P | D | L | I | I | L | D | L | G | L | P | D | G | D | G | I | E | F | I | R | D | L | R | Q | W | S | A | V | P | V | I | V | L | S | A |
Query Conservation |   |
  |
|
|
|
|
|
|
|
|   |   |   |   |   |   |
|   |   |   |
|   |   |   | . |
|   |   |
|   |   |   |   |   |   |   |
|
|
|   |   |   |   |   |   |   |   |
|
|
|
|
|
|   |   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |
|
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|
|   |
|   |
|   |   |
|
|
|
|   |   |
|   |   |   |
|   |   |   |   |   |   |   |
|
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|
|
| . |
|
|
|   |
|   |   |   |   |   |   |   |   |   |   |   |   | . | . |   |   |   |
|
|
|
|
|
|
|
Template Sequence |   |
A | R | V | G | V | L | G | A | K | G | K | V | G | A | T | M | V | R | A | V | A | A | A | D | D | L | T | L | S | A | E | L | D | A | G | D | P | L | S | L | L | T | D | G | N | T | E | V | V | I | . |
D | F | T | H | P | D | V | V | M | G | N | L | E | F | L | I | D | . |
. |
N | G | I | H | A | V | V | G | T | T |
Template Known Secondary structure |   |
|  |  |  |  |  | S | T | T | S |  |  |  |  |  |  |  |  |  |  |  |  |
| S | S | S |  |  |  |  |  |  |
| T | T |
|
| T |  |  |  |  |  | T | T |
| S |  |  |  | . |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | T | T |
|  |  |  |  |
|
|
|
Template Predicted Secondary structure |   |
|  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |
|
|
|
|
|
|  |  |  | . |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |
|
|
|
|  |  |  |  |
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
1 | . | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | |
. | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | |
|
. | . | 70 | . | . | . | . | . | . | . |
  |
  |   |
81 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
Query Sequence |   |
R | S | E | E | S | D | K | I | A |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |   |   |   |   |   |   |
Template Sequence |   |
G | F | T | A | E | R | F | Q | Q |
Template Known Secondary structure |   |
|
|
|  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
  |   |
78 | . | 80 | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|