Job Description P21866 Confidence 99.84% Date Thu Jan 5 11:38:36 GMT 2012 Rank 51 Aligned Residues 181 % Identity 26% Template c1rnlA_ PDB info PDB header:signal transduction protein Chain: A: PDB Molecule:nitrate/nitrite response regulator protein narl; PDBTitle: the nitrate/nitrite response regulator protein narl from narl Resolution 2.40 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.			.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.		.	.	.	.	.	.
Predicted Secondary structure																										.	.																																																.
Query SS confidence																										.	.																																																.
Query Sequence		T	N	V	L	I	V	E	D	E	Q	A	I	R	R	F	L	R	T	A	L	E	G	D	G	.	.	M	R	V	F	E	A	E	T	L	Q	R	G	L	L	E	A	A	T	R	K	P	D	L	I	I	L	D	L	G	L	P	D	G	D	G	I	E	F	I	R	D	L	R	Q	W	S	A	.	V	P	V	I	V	L
Query Conservation																										.	.																																																.
Alig confidence																										.	.																																																.
Template Conservation
Template Sequence		A	T	I	L	L	I	D	D	H	P	M	L	R	T	G	V	K	Q	L	I	S	M	A	P	D	I	T	V	V	G	E	A	S	N	G	E	Q	G	I	E	L	A	E	S	L	D	P	D	L	I	L	L	D	L	N	M	P	G	M	N	G	L	E	T	L	D	K	L	R	E	K	S	L	S	G	R	I	V	V	F
Template Known Secondary structure									S														T		T	T								S	S														S						T	T		G	G	G										T	T	S				S
Template Predicted Secondary structure
Template SS confidence
		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	A	R	S	E	E	S	D	K	I	A	A	L	D	A	G	A	D	D	Y	L	S	K	P	F	G	I	G	E	L	Q	A	R	L	R	V	A	L	R	R	H	S	A	T	T	A	P	D	P	L	V	K	F	S	D	V	T	V	D	L	A	A	R	V	I	H	R	G	E	E	E	V	H	L	T	P	I	E	F	R
Query Conservation
Alig confidence																																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		S	V	S	N	H	E	E	D	V	V	T	A	L	K	R	G	A	D	G	Y	L	L	K	D	M	E	P	E	D	L	L	K	A	L	H	Q	A	A	A	G	E	M	V	L	S	E	A	L	T	P	V	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	A	S	L	Q	L	T	P	R	E	R	D
Template Known Secondary structure			S		S											T	T		S					T	T	S															S						T	T	T					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.																	.	140	.	.	.	.	.	.	.	.	.	150
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	L	A	V	L	L	N	N	A	G	K	V	L	T	Q	R	Q	L	L	N	Q	V	W	G	P	N	A	V	E	H	S	H	Y	L	R	I	Y	M	G	H	L	R	Q	K	L	E	Q	D	P
Query Conservation
Alig confidence										.	.	.	.											.	.	.	.	.
Template Conservation										.	.	.	.											.	.	.	.	.
Template Sequence		I	L	K	L	I	A	Q	G	.	.	.	.	L	P	N	K	M	I	A	R	R	L	.	.	.	.	.	D	I	T	E	S	T	V	K	V	H	V	K	H	M	L	K	K	M	K	L	K	S
Template Known Secondary structure								T	T	.	.	.	.											.	.	.	.	.	T																	T	T			S
Template Predicted Secondary structure										.	.	.	.											.	.	.	.	.
Template SS confidence
		163	.	.	.	.	.	.	170					.	.	.	.	.	.	.	.	.	180						.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions