Job Description P21866 Confidence 100.00% Date Thu Jan 5 11:38:36 GMT 2012 Rank 6 Aligned Residues 212 % Identity 31% Template c1p2fA_ PDB info PDB header:transcription Chain: A: PDB Molecule:response regulator; PDBTitle: crystal structure analysis of response regulator drrb, a2 thermotoga maritima ompr/phob homolog Resolution 1.80 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.		.	.	.	.	.	.	.	80
Predicted Secondary structure																																																																									.
Query SS confidence																																																																									.
Query Sequence		T	N	V	L	I	V	E	D	E	Q	A	I	R	R	F	L	R	T	A	L	E	G	D	G	M	R	V	F	E	A	E	T	L	Q	R	G	L	L	E	A	A	T	R	K	P	D	L	I	I	L	D	L	G	L	P	D	G	D	G	I	E	F	I	R	D	L	R	Q	W	S	A	.	V	P	V	I	V	L	S	A
Query Conservation																																																																									.
Alig confidence																											.													.	.																																.
Template Conservation																											.													.	.
Template Sequence		W	K	I	A	V	V	D	D	D	K	N	I	L	K	K	V	S	E	K	L	Q	Q	L	G	R	.	V	K	T	F	L	T	G	E	D	F	L	N	.	.	D	E	E	A	F	H	V	V	V	L	D	V	X	L	P	D	Y	S	G	Y	E	I	C	R	X	I	K	E	T	R	P	E	T	W	V	I	L	L	T	L
Template Known Secondary structure									S													T	T	T			.					S	S							.	.			S			S						S	B		S	S	S	B													T	T	S							S
Template Predicted Secondary structure																											.													.	.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.		.	.	30	.	.	.	.	.	.	.	.	.			40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure
Query SS confidence
Query Sequence		R	S	E	E	S	D	K	I	A	A	L	D	A	G	A	D	D	Y	L	S	K	P	F	G	I	G	E	L	Q	A	R	L	R	V	A	L	R	R	H	S	A	T	T	A	P	D	P	L	V	K	F	S	D	V	T	V	D	L	A	A	R	V	I	H	R	G	E	E	E	V	H	L	T	P	I	E	F	R	L	L
Query Conservation
Alig confidence																																										.	.	.	.	.
Template Conservation																																										.	.	.	.	.
Template Sequence		L	S	D	D	E	S	V	L	K	G	F	E	A	G	A	D	D	Y	V	T	K	P	F	N	P	E	I	L	L	A	R	V	K	R	F	L	E	R	E	K	.	.	.	.	.	K	G	L	Y	D	F	G	D	L	K	I	D	A	T	G	F	T	V	F	L	K	G	K	R	I	H	L	P	K	K	E	F	E	I	L
Template Known Secondary structure				S											T		S					S	S																			.	.	.	.	.		S					T	T					T	T	T	T					T	T
Template Predicted Secondary structure																																										.	.	.	.	.
Template SS confidence
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.						120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	V	L	L	N	N	A	G	K	V	L	T	Q	R	Q	L	L	N	Q	V	W	G	P	N	A	V	E	H	S	H	Y	L	R	I	Y	M	G	H	L	R	Q	K	L	E	Q	D	P	A	R	P	R	H	F	I	T	E	T	G	I	G	Y	R	F
Query Conservation
Alig confidence																									.	.
Template Conservation																									.	.
Template Sequence		L	F	L	A	E	N	A	G	K	V	V	T	R	E	K	L	L	E	T	F	W	E	D	.	.	P	V	S	P	R	V	V	D	T	V	I	K	R	I	R	K	A	I	E	D	D	P	N	R	P	R	Y	I	K	T	I	W	G	V	G	Y	X	F
Template Known Secondary structure							T	T	T	S													S	S	.	.				T																S	S	T	T	S		S	S					T	T	T
Template Predicted Secondary structure																									.	.
Template SS confidence
		155	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.			.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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