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Job Description | P21866 | Confidence | 99.85% | Date | Thu Jan 5 11:38:36 GMT 2012 |
Rank | 33 | Aligned Residues | 118 |
% Identity | 28% | Template | c1ny5A_ |
PDB info |
PDB header:transcription | Chain: A: PDB Molecule:transcriptional regulator (ntrc family); |
PDBTitle: crystal structure of sigm54 activator (aaa+ atpase) in the inactive2 state
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Resolution | 2.40 Å |
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3 | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | |
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Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
N | V | L | I | V | E | D | E | Q | A | I | R | R | F | L | R | T | A | L | E | G | D | G | M | R | V | F | E | A | E | T | L | Q | R | G | L | L | E | A | A | T | R | K | P | D | L | I | I | L | D | L | G | L | P | D | G | D | G | I | E | F | I | R | D | L | R | Q | W | S | A | . |
V | P | V | I | V | L | S | A | R |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
N | V | L | V | I | E | D | D | K | V | F | R | G | L | L | E | E | Y | L | S | M | K | G | I | K | V | E | S | A | E | R | G | K | E | A | Y | K | L | L | S | E | K | H | F | N | V | V | L | L | D | L | L | L | P | D | V | N | G | L | E | I | L | K | W | I | K | E | R | S | P | E | T | E | V | I | V | I | T | G | H |
Template Known Secondary structure |   |
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| S |  |  |  |  |  | S | B |
| S | S | S | B |  |  |  |  |  |  |  |  |  |  |  |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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  |   |
2 | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . |
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82 | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 |
Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
S | E | E | S | D | K | I | A | A | L | D | A | G | A | D | D | Y | L | S | K | P | F | G | I | G | E | L | Q | A | R | L | R | V | A | L | R | R | H | S |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
G | T | I | K | T | A | V | E | A | M | K | M | G | A | Y | D | F | L | T | K | P | C | M | L | E | E | I | E | L | T | I | N | K | A | I | E | H | R | K |
Template Known Secondary structure |   |
T |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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  |   |
82 | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 |
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No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
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