Return to main results Retrieve Phyre Job Id

Job DescriptionP07330
Confidence49.99%DateThu Jan 5 11:00:15 GMT 2012
Rank262Aligned Residues41
% Identity15%Templated1p3da2
SCOP infoMurD-like peptide ligases, peptide-binding domain MurD-like peptide ligases, peptide-binding domain MurCDEF C-terminal domain
Resolution1.70

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   254.... .260.........270.........280.........290....
Predicted Secondary structure 




.







Query SS confidence 




.



































Query Sequence  NRHRP. SVDVLFHSVAKQAGRNAVGVILTGMGNDGAAGMLAM
Query Conservation      
.


 

 
 
         






 

  
   
Alig confidence 




.



































Template Conservation   



    
    
       
 
 
      
        
Template Sequence  YGHHPTEVGVTIKAAREGWGDKRIVXIFQPHRYSRTRDLFDD
Template Known Secondary structure 


S
SS


B
T
Template Predicted Secondary structure 















Template SS confidence 









































   346...350.........360.........370.........380.......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions