Job Description P07330 Confidence 99.83% Date Thu Jan 5 11:00:15 GMT 2012 Rank 77 Aligned Residues 195 % Identity 18% Template c3lufB_ PDB info PDB header:signaling protein Chain: B: PDB Molecule:two-component system response regulator/ggdef PDBTitle: structure of probable two-component system response2 regulator/ggdef domain protein Resolution 1.76 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	I	R	V	L	S	V	D	D	S	A	L	M	R	Q	I	M	T	E	I	I	N	S	H	S	D	M	E	M	V	A	T	A	P	D	P	L	V	A	R	D	L	I	K	K	F	N	P	D	V	L	T	L	D	V	E	M	P	R	M	D	G	L	D	F	L	E	K	L	M	R	L	R	P	M	P	V	V	M	V
Query Conservation
Alig confidence																															.	.																																										.
Template Conservation																															.	.																																										.
Template Sequence		K	Q	K	I	L	I	V	E	D	S	X	T	I	R	R	X	L	I	Q	A	I	A	Q	Q	T	G	L	E	I	.	.	D	A	F	D	T	L	E	G	A	R	H	C	Q	G	D	E	Y	V	V	A	L	V	D	L	T	L	P	D	A	P	S	G	E	A	V	K	V	L	L	E	R	.	G	L	P	V	V	I	L
Template Known Secondary structure																										S					.	.				S	S	T	G	G	G	T	T			T	T	T								S	S	B	T	T	B	T	T	S									T	.	T
Template Predicted Secondary structure																															.	.																																										.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30			.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.		.	.	.	.	.	.	.
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	S	L	T	G	K	G	S	E	V	T	L	R	A	L	E	L	G	A	I	D	F	V	T	K	P	Q	L	G	I	R	E	G	M	L	A	Y	N	E	M	I	A	E	K	V	R	T	A	A	K	A	S	L	A	A	H	K	P	L	S	A	P	T	T	L	K	A	G	P	L	L	S	S	E	K	L	I	A	I	G
Query Conservation
Alig confidence							.	.																				.	.	.	.
Template Conservation							.	.																				.	.	.	.
Template Sequence		T	A	D	I	S	.	.	E	D	K	R	E	A	W	L	E	A	G	V	L	D	Y	V	X	K	D	.	.	.	.	S	R	H	S	L	Q	Y	A	V	G	L	V	H	R	L	Y	L	N	Q	Q	I	E	V	L	V	V	D	D	S	R	T	S	R	H	R	T	X	A	Q	L	R	K	Q	L	L	Q	V	H	E	A
Template Known Secondary structure			S				.	.										T	T								S	.	.	.	.	S																		T	T								S														T	T	T
Template Predicted Secondary structure							.	.																				.	.	.	.
Template SS confidence
		79	80	.	.	.			.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.					.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.
		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Predicted Secondary structure
Query SS confidence
Query Sequence		A	S	T	G	G	T	E	A	I	R	H	V	L	Q	P	L	P	L	S	S	P	A	L	L	I	T	Q	H	M	P	P	G	F	T	R	S	F	A	D	R	L	N	K	L	C	Q	I	G
Query Conservation
Alig confidence				.	.																	.	.
Template Conservation				.	.																	.	.
Template Sequence		S	H	.	.	A	R	E	A	L	A	T	L	E	Q	H	P	A	I	R	L	.	.	V	L	V	D	Y	Y	X	P	E	I	D	G	I	S	L	V	R	X	L	R	E	R	Y	S	K	Q
Template Known Secondary structure		S	S	.	.												T	T				.	.					S			S	S	S															T	T
Template Predicted Secondary structure				.	.																	.	.
Template SS confidence
		153	.			.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170			.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions