Job Description P07330 Confidence 92.25% Date Thu Jan 5 11:00:15 GMT 2012 Rank 168 Aligned Residues 109 % Identity 17% Template c1y80A_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:predicted cobalamin binding protein; PDBTitle: structure of a corrinoid (factor iiim)-binding protein from2 moorella thermoacetica Resolution 1.70 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		5	.	.	.	.					10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.			.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.			.	.	.	.	.	.	.	70	.	.	.	.
Predicted Secondary structure							.	.	.	.																										.	.																													.	.													.	.
Query SS confidence							.	.	.	.																										.	.																													.	.													.	.
Query Sequence		R	V	L	S	V	.	.	.	.	D	D	S	A	L	M	R	Q	I	M	T	E	I	I	N	S	H	S	D	M	E	M	V	A	T	.	.	A	P	D	P	L	V	A	R	D	L	I	K	K	F	N	P	D	V	L	T	L	D	V	E	M	P	R	M	.	.	D	G	L	D	F	L	E	K	L	M	R	L	.	.
Query Conservation							.	.	.	.																										.	.																													.	.													.	.
Alig confidence							.	.	.	.																		.								.	.																													.	.													.	.
Template Conservation																												.
Template Sequence		K	I	V	L	G	T	V	K	G	D	L	H	D	I	G	K	N	L	V	A	M	M	L	E	S	G	.	G	F	T	V	Y	N	L	G	V	D	I	E	P	G	K	F	V	E	A	V	K	K	Y	Q	P	D	I	V	G	M	S	A	L	L	T	T	T	M	M	N	M	K	S	T	I	D	A	L	I	A	A	G	L
Template Known Secondary structure								B	T	T																	T	.	T								S	S	B															S								S	G	G	G	T													T	T
Template Predicted Secondary structure																												.
Template SS confidence
		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.		.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.
		75	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	P	M	P	V	V	M	V	S	S	L	T	G	K	G	S	E	V	T	L	R	A	L	E	L	G	A	I	D	F	V	T	K	P	Q	L	G	I	R	E	G	M	L	A	Y	N	E	M	I
Query Conservation
Alig confidence																					.	.	.	.												.	.	.	.	.
Template Conservation																					.	.	.	.												.	.	.	.	.
Template Sequence		R	D	R	V	K	V	I	V	G	G	A	P	L	S	Q	D	F	A	D	.	.	.	.	E	I	G	A	D	G	Y	A	P	D	A	.	.	.	.	.	A	S	A	T	E	L	C	R	Q	L
Template Known Secondary structure		G	G	G							S	T	T								.	.	.	.			T		S				S	S		.	.	.	.	.
Template Predicted Secondary structure																					.	.	.	.												.	.	.	.	.
Template SS confidence
		169	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.					.	.	190	.	.	.	.	.	.	.	.						.	200	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions