Job Description P07330 Confidence 58.17% Date Thu Jan 5 11:00:15 GMT 2012 Rank 240 Aligned Residues 77 % Identity 14% Template c1uwvA_ PDB info PDB header:transferase Chain: A: PDB Molecule:23s rrna (uracil-5-)-methyltransferase ruma; PDBTitle: crystal structure of ruma, the iron-sulfur cluster2 containing e. coli 23s ribosomal rna 5-methyluridine3 methyltransferase Resolution 1.95 Å

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		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.			.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
Predicted Secondary structure																																											.	.
Query SS confidence																																											.	.
Query Sequence		R	V	L	S	V	D	D	S	A	L	M	R	Q	I	M	T	E	I	I	N	S	H	S	D	M	E	M	V	A	T	A	P	D	P	L	V	A	R	D	L	I	.	.	K	K	F	N	P	D	V	L	T	L	D	V	E	M	P	R	M	D	G	L	D	F	L	E	K	L	M	R	L	R	P	M	P	V	V	M	V
Query Conservation																																											.	.
Alig confidence																																											.	.																			.	.
Template Conservation																																																															.	.
Template Sequence		S	V	V	G	V	E	G	V	P	A	L	V	E	K	G	Q	Q	N	A	R	L	N	G	L	Q	N	V	T	F	Y	H	E	N	L	E	E	D	V	T	K	Q	P	W	A	K	N	G	F	D	K	V	L	L	D	P	A	R	A	G	A	A	.	.	G	V	X	Q	Q	I	I	K	L	E	P	I	R	I	V	Y	V
Template Known Secondary structure								S															T	T			S								T	T	S			S	S	S	G	G	G	T	T			S								T	T				.	.												S
Template Predicted Secondary structure																																																															.	.
Template SS confidence
		310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370			.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.
		83
Predicted Secondary structure
Query SS confidence
Query Sequence		S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		388

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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