Job Description P76082 Confidence 98.38% Date Thu Jan 5 12:18:25 GMT 2012 Rank 104 Aligned Residues 159 % Identity 18% Template c3u9rB_ PDB info PDB header:ligase Chain: B: PDB Molecule:methylcrotonyl-coa carboxylase, beta-subunit; PDBTitle: crystal structure of p. aeruginosa 3-methylcrotonyl-coa carboxylase2 (mcc), beta subunit Resolution 1.50 Å

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		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	L	L	L	T	L	N	R	P	A	A	R	N	A	L	N	N	A	L	L	M	Q	L	V	N	E	L	E	A	A	A	T	D	T	S	I	S	V	C	V	I	T	G	N	A	R	F	F	A	A	G	A	D	L	N	E	M	A	E	K	D	L	A	A	T	L	N	D	T	R	P	Q	L	W	A	R	L	Q	A	F
Query Conservation
Alig confidence																																												.	.	.	.	.	.
Template Conservation																																												.	.	.	.	.	.
Template Sequence		C	M	I	V	G	N	D	A	T	V	K	G	G	T	Y	Y	P	L	T	V	K	K	H	L	R	A	Q	A	I	A	L	E	N	R	L	P	C	I	Y	L	V	D	.	.	.	.	.	.	S	G	G	A	N	L	P	R	Q	D	E	V	F	P	D	R	E	H	F	G	R	I	F	F	N	Q	A	N	M	S	A	R
Template Known Secondary structure									T	T	T	G	G	G		B																			T									.	.	.	.	.	.				B		G	G	G	G	G	G	T	S	S	S	T	T	S	T	T												T
Template Predicted Secondary structure																																												.	.	.	.	.	.
Template SS confidence
		131	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.							.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.
		92	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.		.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.
Predicted Secondary structure																																	.																																															.	.
Query SS confidence																																	.																																															.	.
Query Sequence		N	K	P	L	I	A	A	V	N	G	Y	A	L	G	A	G	C	E	L	A	L	L	C	D	V	V	V	A	G	E	N	.	A	R	F	G	L	P	E	I	T	L	G	I	M	P	G	A	G	G	T	Q	R	L	I	R	S	V	G	K	S	L	A	S	K	M	V	L	S	G	E	S	I	T	A	Q	Q	A	.	.
Query Conservation																																	.																																															.	.
Alig confidence																																	.							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								.	.												.	.
Template Conservation																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								.	.
Template Sequence		G	I	P	Q	I	A	V	V	M	G	S	C	T	A	G	G	A	Y	V	P	A	M	S	D	E	T	V	M	V	R	E	Q	A	T	I	F	L	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	P	P	L	V	K	A	.	.	A	T	G	E	V	V	S	A	E	E	L	G	G
Template Known Secondary structure		T									S			B	G	G	G	G					T	S	S						T	T	T		B		B	S	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								.	.													B
Template Predicted Secondary structure																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								.	.
Template SS confidence
		205	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.																					.	.	.	.	.	.	.			250	.	.	.	.	.	.	.	.	.	260	.	.
							169	170	.	.	.	.	.	.	.	.	.	180	.	.	.		.	.	.	.	.	.	190	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.																.
Query SS confidence		.	.	.	.	.																.
Query Sequence		.	.	.	.	.	Q	Q	A	G	L	V	S	D	V	F	P	S	D	L	T	.	L	E	Y	A	L	Q	L	A	S	K	M	A	R	H	S
Query Conservation		.	.	.	.	.																.
Alig confidence		.	.	.	.	.																.
Template Conservation
Template Sequence		A	D	V	H	C	K	V	S	G	V	A	D	H	Y	A	E	D	D	D	H	A	L	A	I	A	R	R	C	V	A	N	L	N	W	R	K
Template Known Secondary structure								T	T		S		S				S	S														T	S
Template Predicted Secondary structure
Template SS confidence
		263	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions