|   |
1 | . | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | |
. | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |
|
|  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |
|
| . |
|
|  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
Query Sequence |   |
M | S | E | L | I | V | S | R | Q | Q | R | V | L | L | L | T | L | N | R | P | A | A | R | N | A | L | N | N | A | L | L | M | Q | L | V | N | E | L | E | A | A | A | T | D | T | S | I | S | V | C | V | I | T | G | N | A | R | F | F | A | A | G | A | D | L | N | E | M | A | E | . |
K | D | L | A | A | T | L | N | D |
Query Conservation |   |
|   |   |
|   |   |
|   |   |   |   |
|   |   |
|   |
|
|
|
|   |   |   |
|
|   |   |   |   |   |   |   |   |
|   |   |   |
|   |   |   |   |   |
|   |   |
|   |   |
|
|
|   |
|   |
|   |   |
|
|
|
|   |
|
|   |   |   |   |   | . |   |   |   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |
|   |   |   |   |   |   |   |
|   |   |
|
|
|
|   |
|   |   |   |
|
|
|   |   |   |   |   |   |
|
|   |   |   |
|   |   |   |   |   |
|   |   |
|   |   |
|
|
|   |
|   |
|   |   |
|   |   |
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
Template Sequence |   |
M | V | Y | I | D | Y | G | V | A | D | S | I | A | T | I | T | L | N | R | P | E | A | A | N | A | Q | N | P | E | L | L | D | E | L | D | A | A | W | T | R | A | A | E | D | N | E | V | K | V | I | I | L | R | A | N | G | K | H | F | S | A | G | H | D | L | P | E | K | I | S | L | E | F | I | I | Q | H | E | A | R |
Template Known Secondary structure |   |
|
| S |  |  |  |  |  |  | T | T |  |  |  |  |  |  |
|
| G | G | G | T | T |
| B |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
| T | T |
|
|  |  |  |  |  |  | S | S | S |
| S | B |
|
| B |
|
|
|
| S |
|
|  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
0 | . | . | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . |
  |
  |   |
80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |
|
|
|
|  |  |
|
|
|  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
T | R | P | Q | L | W | A | R | L | Q | A | F | N | K | P | L | I | A | A | V | N | G | Y | A | L | G | A | G | C | E | L | A | L | L | C | D | V | V | V | A | G | E | N | A | R | F | G | L | P | E | I | T | L | G | I | M | P | G | A | G | G | T | Q | R | L | I | R | S | V | G | K | S | L | A | S | K | M | V | L | S |
Query Conservation |   |
  |   |   |   |
|   |   |   |   |   |   |   |   |   |
|
|
|
|
|
|   |
|   |
|   |
|
|
|   |   |
|
|
|   |   |
|   |
|
|
|   |   |   |
|   |   |   |   |
|
|   |   |   |
|   |   |
|   |   |   |   |   |   |   |
|   |   |   |   |
|   |   |   |
|   |   |
|   |
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |
|   |   |   |
|   |   |   |   |
|
|   |
|
|
|
|   |
|   |
|   |
|
|
|   |   |
|   |   |   |   |
|   |   |
|
|   |   |   |   |   |
|   |   |
|
|   |   |   |
|   |   |
|   |   |   |   |   | . | . |
|   |   |   |   |
|   |   |   |
|   |   |
|   |
|
|
Template Sequence |   |
R | Y | L | D | Y | T | L | R | W | R | N | V | P | K | P | S | I | A | A | V | Q | G | R | C | I | S | G | G | L | L | L | C | W | P | C | D | L | I | L | A | S | D | D | A | L | F | S | D | P | V | A | L | M | G | I | G | G | V | E | Y | H | G | . |
. |
H | T | W | E | L | G | P | R | K | A | K | E | I | L | F | T |
Template Known Secondary structure |   |
 | T | T |  |  |  |  |  |  |  | T |
| S | S |
|  |  |  |  |  |
| S |  |  |  | T | T |  |  |  |  |  | T | T | S | S |  |  |  |  |  | T | T |
|  |  |  |
|
| G | G | G | G | T |
| S | S |
| S | S |
|
| . | . |  |  |  |  |  |
|  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |
|
|
|
|  |  |
|
|
|  |  |
|
|
|
|
|
|
|
|  |  |  | . | . |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
86 | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | |
|
. | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . |
  |
  |   |
160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | |
. | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
G | E | S | I | T | A | Q | Q | A | Q | Q | A | G | L | V | S | D | V | F | P | S | D | L | T | L | E | Y | A | L | Q | L | A | S | K | M | A | R | H | S | P | L | A | L | Q | A | A | K | Q | A | L | R | Q | S | Q | . |
E | V | A | L | Q | A | G | L | A | Q | E | R | Q | L | F | T | L | L | A | A | T | E | D | R | H |
Query Conservation |   |
|   |   |   |   |
|   |
|
|   |   |   |
|
|
|
|   |
|
|   |   |   |   |   |   |   |   |
|   |   |   |
|   |   |
|   |   |   |   |   |   |
|   |   |   |   |
|   |   |
|   |   |   |   | . |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |   |   |
|   |
|
|   |   |   |
|
|
|   |   |
|   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |   |
|
|   |   |   |   |   |
|   |   |   |   |
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
Template Sequence |   |
G | R | A | L | T | A | E | E | A | E | R | T | G | M | V | N | R | V | V | A | R | D | E | L | D | A | Q | T | R | E | L | A | E | Q | I | A | T | M | P | P | F | A | L | R | Q | A | K | R | A | V | N | Q | T | L | D | V | Q | G | F | Y | A | A | I | Q | S | V | F | D | I | H | Q | T | G | H | G | N | A | L | S | V |
Template Known Secondary structure |   |
|
|
|  |  |  |  |  |  |  |  |  | T | S |
| S |  |  |  |
| G | G | G |  |  |  |  |  |  |  |  |  |  |  |  | T | T | S |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
164 | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . |
  |
  |   |
239 | 240 |
Predicted Secondary structure |   |
 |  |
Query SS confidence |   |
|
|
Query Sequence |   |
E | G |
Query Conservation |   |
|   |
Alig confidence |   |
|
|
Template Conservation |   |
  |
|
Template Sequence |   |
S | G |
Template Known Secondary structure |   |
 | S |
Template Predicted Secondary structure |   |
|
|
Template SS confidence |   |
|
|
  |   |
244 | . |
  |